Gene detail

Detail information of GWHGAAZE007236

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002278009.1	0	PREDICTED: cytochrome P450 94A1 [Vitis vinifera]
Swissprot	tr\|O81117\|C94A1_VICSA	1E-149	Cytochrome P450 94A1
trEMBL	tr\|F6HQP9\|F6HQP9_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB57130.1}
TAIR10	AT3G56630.1	4E-177	cytochrome P450, family 94, subfamily D, polypeptide 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	41015995	41020372	-
GWHAAZE00000002	mRNA	41015995	41020372	-
GWHAAZE00000002	exon	41015995	41017134	-
GWHAAZE00000002	exon	41020100	41020372	-
GWHAAZE00000002	CDS	41020100	41020372	-
GWHAAZE00000002	CDS	41015995	41017134	-

Transcript Sequence
>GWHTAAZE007244 ATGTACCCAATTCTCGGAACCATACCGGAGTTCCTCCTCAACCGCCACCGCTTTCTTGACTGGAGCACCGAAATCCTCTCCAGAACCCCCACGAACACCGCCGTGTTCCACCGCCCCGGTAAAATCCAAGGCCTAATCACGGCGAACCCAATAAACGTGGAGCACATGCTCAAAACAAATTTCGAAAACTACCCAAAAGGCCCTCGATTCATCGAAATCCTGGAAGATTTCCTCGGCGGAGGAATCTTCAATTCCGACGGCGATCTCTGGAAGGTACAACGCAAAACAGCCAGTTACGAATTCAACACCAAATCTCTTAGAAATTTTGTGATAGACAACGTGACGGTTGAGGCTCAAACCCGGTTAATTCCAGTATTACAAAAAGCGGCCCAATCGAACCGGGTTTTGGATCTACAAGACGTTTTAGAGCGGTTTGCGTTTGATAATATCTGTAAAGTTGCATTTAATGTGGACCCTGGATGCCTAGGCGGAGTTGTAACGAACGGTGGAGATTTCATGCGAGCTTTCGAAGAAGCAGCCACATTAAGTTCAGCAAGATTTATGTATGCTTTTCCAATTATGTTCAGAATCAAAAAAATGCTTAACTTGGGATCTGAAAAAAGGTTGCAGAAATCAGTCCTGATCGTCCATGAGTTTGCGGACAATATCATACAGTCCAGATTGCAAGAGGGGTCTAATAAAAAAGACGAGGATTTACTCAGCCGTTTTATTGGAGACAATAACTCGGCCGAGTTTTTACGAGACATAATTATAAGTTTTATTTTAGCAGGCCGTGATACAACGTCGTCAGCTTTAACTTGGTTCTTTTGGTTATTGTCAAAAGAACCGAAGGTTAAAAATAAAATACTAAAGGAGCTAAAAACGGTTCGCTATAAGATCGGGAAAAAACCCGGTGAAAACTACAGTTTTGACGAGTTACGGGAAATGCATTATCTACACGCGGCTATATCGGAGTCGTTAAGGCTATACCCGCCGGTGGCGATAGACACGAAGGAATGCCTTAAAGATGATGTCATGCCAGATGGGACTTTCGTGGGGAAAGATTGGTTTGTAATGTACCATGCGTATGCTATGGGGAGGATGGAGAATATATGGGGAAAAGATTGGTCCGAGTTTAGACCGGATCGGTGGATTGGTGATGGAGGGTTTGAACCGGAGAATCCATTTCGGTTCCCAGTTTTTCACGGCGGTCCGAGGATGTGTTTGGGGAAAGATATGGCCTATATTCAGATGAAGTCAATTGTAGCATCTGTGATTGAGAGGTTTGAGATTGATGTACAAGATAGGAACACGTGTCCCGAGCATGTGTTATCATTGACGCTTAGGATGAAAAATGGGTTACCAGTAACAGTGAAAGAGAGACGTGTGGATAAGACTAATTGTGATAACTAG

Network for GWHGAAZE007236

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	45	441	1.20E-63

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	8.222
	SRR3591706	second leaf	18.131
	SRR3591707	mature leaf	8.057
	SRR3591708	Shoot apex	12.592
	SRR3591709	Stem	12.383
	SRR3591710	White floral bud	10.741
	SRR3591711	White flower	23.525
	SRR3591712	Green floral bud	2.290
	SRR3591713	Yellow flower	10.122
SRP173429	SRR8316895	Juvenile bud stage	4.205
	SRR8316896	Juvenile bud stage	3.861
	SRR8316897	Juvenile bud stage	1.617
	SRR8316894	Third green stage	1.025
	SRR8316900	Third green stage	0.613
	SRR8316901	Third green stage	0.887
	SRR8316898	Complete white stage	1.126
	SRR8316899	Complete white stage	3.289
	SRR8316903	Complete white stage	3.304
	SRR8316902	Silver flowering stage	0.630
	SRR8316904	Silver flowering stage	1.442
	SRR8316905	Silver flowering stage	0.174
	SRR8316906	Gold flowering stage	0.885
	SRR8316907	Gold flowering stage	1.574
	SRR8316908	Gold flowering stage	12.778
SRP132670	SRR6706286	Control	2.573
	SRR6706287	Light intensity 50%	1.916
	SRR6706288	Light intensity 20%	1.468
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	3.116
	CNS0095593	Slightly white alabastrum(diploid) 2	4.257
	CNS0095594	Slightly white alabastrum(diploid) 3	2.110
	CNS0095595	Whole white alabastrum(diploid) 2	2.593
	CNS0095596	Whole white alabastrum(diploid) 3	0.438
	CNS0095597	Whole white alabastrum(diploid) 4	2.081
	CNS0095598	Silvery flower (diploied) 1	21.789
	CNS0095599	Silvery flower (diploied) 2	19.061
	CNS0095600	Silvery flower (diploied) 3	8.840
	CNS0095601	Golden flower (diploid) 1	24.896
	CNS0095602	Golden flower (diploid) 2	22.967
	CNS0095603	Golden flower (diploid) 3	19.229
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.173
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.279
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.594
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.209
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.198
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.402
	CNS0095610	Silvery flower (tetraploid) 1	0.442
	CNS0095611	Silvery flower (tetraploid) 2	0.991
	CNS0095612	Silvery flower (tetraploid) 3	0.342
	CNS0095613	Golden flower (tetraploid) 1	0.685
	CNS0095614	Golden flower (tetraploid) 2	0.823
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	1.609
	CRR073298	Stem 2	1.853
	CRR073299	Stem 3	2.107
	CRR073300	Leaf 1	0.103
	CRR073301	Leaf 2	0.367
	CRR073302	Leaf 3	0.193
	CRR073303	Juvenile bud 1	0.092
	CRR073304	Juvenile bud 2	0.092
	CRR073305	Juvenile bud 3	0.503
	CRR073306	Third green 1	1.082
	CRR073307	Third green 2	0.454
	CRR073308	Third green 3	1.411
	CRR073309	Second white 1	0.065
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.128
	CRR073312	Silver flowering 1	0.034
	CRR073313	Silver flowering 2	0.132
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	3.789
	CRR073316	Gold flowering 2	6.748
	CRR073317	Gold flowering 3	5.122
	CRR073318	Tawny withering 1	1.965
	CRR073319	Tawny withering 2	2.084
	CRR073320	Tawny withering 3	1.325