Detail information of GWHGAAZE007264


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011070029.12.4044E-137PREDICTED: ubiquitin-conjugating enzyme E2 22 [Sesamum indicum]
Swissprottr|Q9FF66|UBC22_ARATH3E-122Ubiquitin-conjugating enzyme E2 22
trEMBLtr|F6HQS0|F6HQS0_VITVI9E-136Putative uncharacterized protein {ECO:0000313|EMBL:CCB57151.1}
TAIR10AT5G05080.26E-95ubiquitin-conjugating enzyme 22

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene4159390341597135-
GWHAAZE00000002mRNA4159390341597135-
GWHAAZE00000002exon4159713341597135-
GWHAAZE00000002exon4159670941596853-
GWHAAZE00000002exon4159653441596611-
GWHAAZE00000002exon4159596441596076-
GWHAAZE00000002exon4159568041595783-
GWHAAZE00000002exon4159390341594248-
GWHAAZE00000002CDS4159713341597135-
GWHAAZE00000002CDS4159670941596853-
GWHAAZE00000002CDS4159653441596611-
GWHAAZE00000002CDS4159596441596076-
GWHAAZE00000002CDS4159568041595783-
GWHAAZE00000002CDS4159390341594248-
Transcript Sequence

Network for GWHGAAZE007264

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.27UQ_con151509.40E-39
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K10583UBE2S, E2EPF Ubiquitin mediated proteolysis map04120

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf71.317
SRR3591706second leaf15.822
SRR3591707mature leaf14.589
SRR3591708Shoot apex53.441
SRR3591709Stem40.371
SRR3591710White floral bud29.596
SRR3591711White flower43.892
SRR3591712Green floral bud28.005
SRR3591713Yellow flower35.385
SRP173429 SRR8316895Juvenile bud stage 32.837
SRR8316896Juvenile bud stage 34.424
SRR8316897Juvenile bud stage 26.200
SRR8316894Third green stage 10.452
SRR8316900Third green stage 19.276
SRR8316901Third green stage 27.334
SRR8316898Complete white stage 11.765
SRR8316899Complete white stage 33.300
SRR8316903Complete white stage 13.788
SRR8316902Silver flowering stage25.198
SRR8316904Silver flowering stage17.508
SRR8316905Silver flowering stage9.930
SRR8316906Gold flowering stage 33.365
SRR8316907Gold flowering stage 34.407
SRR8316908Gold flowering stage 33.251
SRP132670SRR6706286Control19.749
SRR6706287Light intensity 50%20.324
SRR6706288Light intensity 20%21.511
CNP0000432CNS0095592Slightly white alabastrum(diploid) 129.618
CNS0095593Slightly white alabastrum(diploid) 225.927
CNS0095594Slightly white alabastrum(diploid) 334.326
CNS0095595Whole white alabastrum(diploid) 222.781
CNS0095596Whole white alabastrum(diploid) 314.507
CNS0095597Whole white alabastrum(diploid) 421.087
CNS0095598Silvery flower (diploied) 128.441
CNS0095599Silvery flower (diploied) 225.974
CNS0095600Silvery flower (diploied) 326.254
CNS0095601Golden flower (diploid) 122.027
CNS0095602Golden flower (diploid) 224.883
CNS0095603Golden flower (diploid) 322.050
CNS0095604Slightly white alabastrum(tetraploid) 125.115
CNS0095605Slightly white alabastrum(tetraploid) 225.255
CNS0095606Slightly white alabastrum(tetraploid) 326.124
CNS0095607Whole white alabastrum(tetraploid) 118.007
CNS0095608Whole white alabastrum(tetraploid) 212.815
CNS0095609Whole white alabastrum(tetraploid) 314.647
CNS0095610Silvery flower (tetraploid) 123.620
CNS0095611Silvery flower (tetraploid) 222.471
CNS0095612Silvery flower (tetraploid) 326.807
CNS0095613Golden flower (tetraploid) 123.001
CNS0095614Golden flower (tetraploid) 220.394
CNS0095615Golden flower (tetraploid) 325.706
CRA001975CRR073297Stem 119.582
CRR073298Stem 214.930
CRR073299Stem 318.220
CRR073300Leaf 110.765
CRR073301Leaf 215.130
CRR073302Leaf 312.133
CRR073303Juvenile bud 112.555
CRR073304Juvenile bud 27.864
CRR073305Juvenile bud 312.008
CRR073306Third green 114.944
CRR073307Third green 218.804
CRR073308Third green 312.465
CRR073309Second white 111.316
CRR073310Second white 210.906
CRR073311Second white 312.977
CRR073312Silver flowering 16.810
CRR073313Silver flowering 26.272
CRR073314Silver flowering 311.649
CRR073315Gold flowering 15.788
CRR073316Gold flowering 215.378
CRR073317Gold flowering 37.682
CRR073318Tawny withering 121.583
CRR073319Tawny withering 226.903
CRR073320Tawny withering 322.393