Detail information of GWHGAAZE007289


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002264440.10PREDICTED: calcium-dependent protein kinase 1 [Vitis vinifera]
Swissprottr|Q06850|CDPK1_ARATH0Calcium-dependent protein kinase 1
trEMBLtr|F6I3K8|F6I3K8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB61572.1}
TAIR10AT5G04870.10calcium dependent protein kinase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene4211532042119057-
GWHAAZE00000002mRNA4211532042119057-
GWHAAZE00000002exon4211820542119057-
GWHAAZE00000002exon4211766142117804-
GWHAAZE00000002exon4211721342117416-
GWHAAZE00000002exon4211698742117102-
GWHAAZE00000002exon4211670842116875-
GWHAAZE00000002exon4211574742115971-
GWHAAZE00000002exon4211532042115445-
GWHAAZE00000002CDS4211820542119057-
GWHAAZE00000002CDS4211766142117804-
GWHAAZE00000002CDS4211721342117416-
GWHAAZE00000002CDS4211698742117102-
GWHAAZE00000002CDS4211670842116875-
GWHAAZE00000002CDS4211574742115971-
GWHAAZE00000002CDS4211532042115445-
Transcript Sequence

Network for GWHGAAZE007289

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase1304056.50E-72
PF13499.7EF-hand_74535131.30E-10
PF13499.7EF-hand_75255832.50E-13
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding
GO:0005509molecular_functioncalcium ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf27.706
SRR3591706second leaf1.185
SRR3591707mature leaf0.622
SRR3591708Shoot apex2.203
SRR3591709Stem7.863
SRR3591710White floral bud3.036
SRR3591711White flower2.489
SRR3591712Green floral bud3.342
SRR3591713Yellow flower3.483
SRP173429 SRR8316895Juvenile bud stage 29.714
SRR8316896Juvenile bud stage 21.922
SRR8316897Juvenile bud stage 24.837
SRR8316894Third green stage 0.803
SRR8316900Third green stage 2.562
SRR8316901Third green stage 10.248
SRR8316898Complete white stage 0.556
SRR8316899Complete white stage 11.694
SRR8316903Complete white stage 0.526
SRR8316902Silver flowering stage1.204
SRR8316904Silver flowering stage1.100
SRR8316905Silver flowering stage0.722
SRR8316906Gold flowering stage 4.722
SRR8316907Gold flowering stage 1.346
SRR8316908Gold flowering stage 5.091
SRP132670SRR6706286Control2.426
SRR6706287Light intensity 50%2.737
SRR6706288Light intensity 20%1.605
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.832
CNS0095593Slightly white alabastrum(diploid) 210.280
CNS0095594Slightly white alabastrum(diploid) 313.070
CNS0095595Whole white alabastrum(diploid) 211.547
CNS0095596Whole white alabastrum(diploid) 31.323
CNS0095597Whole white alabastrum(diploid) 46.501
CNS0095598Silvery flower (diploied) 112.781
CNS0095599Silvery flower (diploied) 248.240
CNS0095600Silvery flower (diploied) 314.126
CNS0095601Golden flower (diploid) 135.823
CNS0095602Golden flower (diploid) 227.159
CNS0095603Golden flower (diploid) 324.830
CNS0095604Slightly white alabastrum(tetraploid) 11.139
CNS0095605Slightly white alabastrum(tetraploid) 20.802
CNS0095606Slightly white alabastrum(tetraploid) 30.709
CNS0095607Whole white alabastrum(tetraploid) 13.407
CNS0095608Whole white alabastrum(tetraploid) 26.609
CNS0095609Whole white alabastrum(tetraploid) 33.633
CNS0095610Silvery flower (tetraploid) 11.787
CNS0095611Silvery flower (tetraploid) 20.254
CNS0095612Silvery flower (tetraploid) 30.655
CNS0095613Golden flower (tetraploid) 10.512
CNS0095614Golden flower (tetraploid) 21.213
CNS0095615Golden flower (tetraploid) 30.554
CRA001975CRR073297Stem 12.559
CRR073298Stem 22.918
CRR073299Stem 31.277
CRR073300Leaf 13.891
CRR073301Leaf 27.212
CRR073302Leaf 30.969
CRR073303Juvenile bud 12.251
CRR073304Juvenile bud 23.847
CRR073305Juvenile bud 32.670
CRR073306Third green 10.437
CRR073307Third green 20.158
CRR073308Third green 30.372
CRR073309Second white 10.373
CRR073310Second white 20.741
CRR073311Second white 30.313
CRR073312Silver flowering 12.014
CRR073313Silver flowering 20.634
CRR073314Silver flowering 31.813
CRR073315Gold flowering 10.939
CRR073316Gold flowering 24.610
CRR073317Gold flowering 31.887
CRR073318Tawny withering 12.323
CRR073319Tawny withering 210.742
CRR073320Tawny withering 30.735