Detail information of GWHGAAZE007312


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011099435.19.31534E-55PREDICTED: WD repeat-containing protein 5 [Sesamum indicum]
Swissprottr|Q9CAA0|COB21_ARATH2E-13Coatomer subunit beta'-1
trEMBLtr|A0A096UQD9|A0A096UQD9_WHEAT9E-55Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_4AL_8E6C7B2EB.2}
TAIR10AT3G49660.15E-38Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene4266754442667861-
GWHAAZE00000002mRNA4266754442667861-
GWHAAZE00000002exon4266754442667861-
GWHAAZE00000002CDS4266754442667861-
Transcript Sequence

Network for GWHGAAZE007312

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.33WD4017585.20E-06
PF00400.33WD40631019.20E-06
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.630
SRR3591706second leaf2.942
SRR3591707mature leaf1.889
SRR3591708Shoot apex13.880
SRR3591709Stem5.393
SRR3591710White floral bud2.863
SRR3591711White flower4.665
SRR3591712Green floral bud8.475
SRR3591713Yellow flower2.540
SRP173429 SRR8316895Juvenile bud stage 7.845
SRR8316896Juvenile bud stage 8.110
SRR8316897Juvenile bud stage 4.996
SRR8316894Third green stage 3.654
SRR8316900Third green stage 13.119
SRR8316901Third green stage 11.257
SRR8316898Complete white stage 0.676
SRR8316899Complete white stage 6.155
SRR8316903Complete white stage 1.938
SRR8316902Silver flowering stage1.004
SRR8316904Silver flowering stage2.364
SRR8316905Silver flowering stage0.253
SRR8316906Gold flowering stage 2.215
SRR8316907Gold flowering stage 3.782
SRR8316908Gold flowering stage 2.590
SRP132670SRR6706286Control2.612
SRR6706287Light intensity 50%4.888
SRR6706288Light intensity 20%5.037
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.807
CNS0095593Slightly white alabastrum(diploid) 213.943
CNS0095594Slightly white alabastrum(diploid) 38.317
CNS0095595Whole white alabastrum(diploid) 26.104
CNS0095596Whole white alabastrum(diploid) 37.641
CNS0095597Whole white alabastrum(diploid) 43.655
CNS0095598Silvery flower (diploied) 15.404
CNS0095599Silvery flower (diploied) 28.581
CNS0095600Silvery flower (diploied) 34.923
CNS0095601Golden flower (diploid) 15.406
CNS0095602Golden flower (diploid) 23.845
CNS0095603Golden flower (diploid) 33.815
CNS0095604Slightly white alabastrum(tetraploid) 111.701
CNS0095605Slightly white alabastrum(tetraploid) 213.410
CNS0095606Slightly white alabastrum(tetraploid) 319.380
CNS0095607Whole white alabastrum(tetraploid) 19.235
CNS0095608Whole white alabastrum(tetraploid) 25.614
CNS0095609Whole white alabastrum(tetraploid) 39.063
CNS0095610Silvery flower (tetraploid) 19.085
CNS0095611Silvery flower (tetraploid) 27.124
CNS0095612Silvery flower (tetraploid) 33.282
CNS0095613Golden flower (tetraploid) 13.200
CNS0095614Golden flower (tetraploid) 24.189
CNS0095615Golden flower (tetraploid) 31.243
CRA001975CRR073297Stem 14.957
CRR073298Stem 23.683
CRR073299Stem 36.124
CRR073300Leaf 15.127
CRR073301Leaf 21.564
CRR073302Leaf 34.044
CRR073303Juvenile bud 13.422
CRR073304Juvenile bud 20.784
CRR073305Juvenile bud 34.442
CRR073306Third green 11.143
CRR073307Third green 21.406
CRR073308Third green 30.076
CRR073309Second white 14.570
CRR073310Second white 21.827
CRR073311Second white 30.501
CRR073312Silver flowering 10.590
CRR073313Silver flowering 21.625
CRR073314Silver flowering 31.184
CRR073315Gold flowering 11.575
CRR073316Gold flowering 23.451
CRR073317Gold flowering 31.712
CRR073318Tawny withering 14.700
CRR073319Tawny withering 21.660
CRR073320Tawny withering 36.499