Detail information of GWHGAAZE007352


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010660373.12.24972E-77PREDICTED: serine/threonine-protein kinase TNNI3K-like isoform X1 [Vitis vinifera]
Swissprottr|Q94A76|GORK_ARATH9E-17Potassium channel GORK
trEMBLtr|K4BCR5|K4BCR5_SOLLC1E-79Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc02g091160.2.1}
TAIR10AT3G58760.13E-19Integrin-linked protein kinase family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene4373034843732066-
GWHAAZE00000002mRNA4373034843732066-
GWHAAZE00000002exon4373168943732066-
GWHAAZE00000002exon4373069743730789-
GWHAAZE00000002exon4373034843730443-
GWHAAZE00000002CDS4373168943732066-
GWHAAZE00000002CDS4373069743730789-
GWHAAZE00000002CDS4373034843730443-
Transcript Sequence

Network for GWHGAAZE007352

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12796.8Ank_2741432.60E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06272ILK Focal adhesion map04510
PPAR signaling pathwaymap03320
Axon guidancemap04360

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.296
SRR3591706second leaf0.224
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.189
SRR3591709Stem0.397
SRR3591710White floral bud0.000
SRR3591711White flower0.100
SRR3591712Green floral bud0.504
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.531
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.357
SRR8316900Third green stage 0.169
SRR8316901Third green stage 0.354
SRR8316898Complete white stage 0.076
SRR8316899Complete white stage 0.201
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.119
SRR6706287Light intensity 50%0.151
SRR6706288Light intensity 20%0.162
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.198
CNS0095593Slightly white alabastrum(diploid) 20.080
CNS0095594Slightly white alabastrum(diploid) 30.258
CNS0095595Whole white alabastrum(diploid) 20.036
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.355
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.107
CNS0095603Golden flower (diploid) 30.000
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.105
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.128
CNS0095609Whole white alabastrum(tetraploid) 30.100
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.114
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.462
CRR073298Stem 20.288
CRR073299Stem 30.857
CRR073300Leaf 10.599
CRR073301Leaf 20.441
CRR073302Leaf 30.207
CRR073303Juvenile bud 10.182
CRR073304Juvenile bud 20.023
CRR073305Juvenile bud 30.107
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.225
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.029
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000