Detail information of GWHGAAZE007393


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002280181.10PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1 [Vitis vinifera]
Swissprottr|Q9FF17|ALG6_ARATH0Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase
trEMBLtr|D7TT36|D7TT36_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI33658.3}
TAIR10AT5G38460.20ALG6, ALG8 glycosyltransferase family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene4434255444347327-
GWHAAZE00000002mRNA4434255444347327-
GWHAAZE00000002exon4434255444343002-
GWHAAZE00000002exon4434400344344255-
GWHAAZE00000002exon4434439344344554-
GWHAAZE00000002exon4434576444345871-
GWHAAZE00000002exon4434598344346166-
GWHAAZE00000002exon4434694544347327-
GWHAAZE00000002CDS4434694544347327-
GWHAAZE00000002CDS4434598344346166-
GWHAAZE00000002CDS4434576444345871-
GWHAAZE00000002CDS4434439344344554-
GWHAAZE00000002CDS4434400344344255-
GWHAAZE00000002CDS4434255444343002-
Transcript Sequence

Network for GWHGAAZE007393

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03155.16Alg6_Alg8354891.00E-135
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03848ALG6 Metabolic pathways map01100
N-Glycan biosynthesismap00510

Gene Ontology

GO term OntologyName
GO:0005789cellular_componentendoplasmic reticulum membrane
GO:0016758molecular_functiontransferase activity, transferring hexosyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf27.275
SRR3591706second leaf10.015
SRR3591707mature leaf6.977
SRR3591708Shoot apex20.962
SRR3591709Stem24.306
SRR3591710White floral bud24.965
SRR3591711White flower24.165
SRR3591712Green floral bud24.033
SRR3591713Yellow flower18.195
SRP173429 SRR8316895Juvenile bud stage 12.336
SRR8316896Juvenile bud stage 13.096
SRR8316897Juvenile bud stage 6.234
SRR8316894Third green stage 6.691
SRR8316900Third green stage 18.303
SRR8316901Third green stage 16.838
SRR8316898Complete white stage 5.581
SRR8316899Complete white stage 20.174
SRR8316903Complete white stage 12.979
SRR8316902Silver flowering stage7.020
SRR8316904Silver flowering stage12.320
SRR8316905Silver flowering stage5.309
SRR8316906Gold flowering stage 17.170
SRR8316907Gold flowering stage 15.078
SRR8316908Gold flowering stage 17.321
SRP132670SRR6706286Control15.746
SRR6706287Light intensity 50%16.673
SRR6706288Light intensity 20%18.174
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.695
CNS0095593Slightly white alabastrum(diploid) 212.006
CNS0095594Slightly white alabastrum(diploid) 314.773
CNS0095595Whole white alabastrum(diploid) 211.273
CNS0095596Whole white alabastrum(diploid) 311.635
CNS0095597Whole white alabastrum(diploid) 49.916
CNS0095598Silvery flower (diploied) 111.755
CNS0095599Silvery flower (diploied) 211.676
CNS0095600Silvery flower (diploied) 322.550
CNS0095601Golden flower (diploid) 111.746
CNS0095602Golden flower (diploid) 223.583
CNS0095603Golden flower (diploid) 322.784
CNS0095604Slightly white alabastrum(tetraploid) 114.801
CNS0095605Slightly white alabastrum(tetraploid) 211.818
CNS0095606Slightly white alabastrum(tetraploid) 321.860
CNS0095607Whole white alabastrum(tetraploid) 17.632
CNS0095608Whole white alabastrum(tetraploid) 26.858
CNS0095609Whole white alabastrum(tetraploid) 315.560
CNS0095610Silvery flower (tetraploid) 116.546
CNS0095611Silvery flower (tetraploid) 219.083
CNS0095612Silvery flower (tetraploid) 315.043
CNS0095613Golden flower (tetraploid) 18.812
CNS0095614Golden flower (tetraploid) 215.740
CNS0095615Golden flower (tetraploid) 316.820
CRA001975CRR073297Stem 114.410
CRR073298Stem 213.597
CRR073299Stem 313.726
CRR073300Leaf 115.156
CRR073301Leaf 213.930
CRR073302Leaf 316.125
CRR073303Juvenile bud 117.151
CRR073304Juvenile bud 213.366
CRR073305Juvenile bud 319.932
CRR073306Third green 16.923
CRR073307Third green 25.829
CRR073308Third green 37.954
CRR073309Second white 110.640
CRR073310Second white 210.810
CRR073311Second white 310.028
CRR073312Silver flowering 18.089
CRR073313Silver flowering 28.743
CRR073314Silver flowering 37.741
CRR073315Gold flowering 16.565
CRR073316Gold flowering 25.615
CRR073317Gold flowering 35.652
CRR073318Tawny withering 116.786
CRR073319Tawny withering 215.995
CRR073320Tawny withering 315.874