Gene detail

Detail information of GWHGAAZE007399

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP32938.1	4.1957E-136	hypothetical protein JCGZ_12969 [Jatropha curcas]
Swissprot	tr\|P42644\|14333_ARATH	7E-134	14-3-3-like protein GF14 psi {ECO:0000303\|PubMed:7972511}
trEMBL	tr\|A0A067KD35\|A0A067KD35_JATCU	2E-136	Uncharacterized protein {ECO:0000313\|EMBL:KDP32938.1}
TAIR10	AT5G38480.1	3E-106	general regulatory factor 3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	44625935	44628805	+
GWHAAZE00000002	mRNA	44625935	44628805	+
GWHAAZE00000002	exon	44625935	44626405	+
GWHAAZE00000002	exon	44628142	44628258	+
GWHAAZE00000002	exon	44628746	44628805	+
GWHAAZE00000002	CDS	44625935	44626405	+
GWHAAZE00000002	CDS	44628142	44628258	+
GWHAAZE00000002	CDS	44628746	44628805	+

Transcript Sequence
>GWHTAAZE007407 ATGTCTCGTGAGGAAAATGTGTACATGGCTAAGCTTGCCGAGCAGGCTGAGCGGTACGAGGAAATGGTAGAGTTCATGGAGAAAGTTGCAAAGACCGTGGATATTGAGGAGCTGACTGTGGAGGAGAGGAACCTCCTTTCTGTTGCTTACAAGAATGTGATTGGTGCTCGGAGGGCGTCGTGGAGGATCATATCTTCCATAGAGCAGAAAGAAGAGAGCCGCGGGAACGAAGATCATGTTAGTCTCATCAAGGACTATAGGGGTAAGATCGAGACTGAACTCAGCAAGATATGTGATGGGATATTGAACCTTCTCGATTCCCACCTCGTTCCATCGGCCTCGTCTGCTGAGTCCAAGGTGTTTTACTTGAAGATGAAGGGTGACTACCATAGGTACCTGGCTGAGTTTAAGACGGGGGCTGAGAGGAAAGAGGCGGCCGAAAGTACTTTGTTAGCTTACAAGTCTGCTCAGGCTTTTGATGAAGCCATATCTGAGCTGGATACATTGGGCGAGGAATCATACAAGGACAGCACATTGATCATGCAACTTCTCCGAGACAATCTGACATTGTGGACTTCTGATCTCACGGATGAGGCTGGGGACGAAATAAAGGAAACTTCGAAGCCAGACTCGGGCGAGGGGCAGTGA

Network for GWHGAAZE007399

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00244.21	2014/3/3	9	157	5.70E-59
PF00244.21	2014/3/3	156	192	8.10E-14

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K06630	YWHAE	MAPK signaling pathway - yeast	map04011
		Hippo signaling pathway	map04390
		Hippo signaling pathway - fly	map04391
		PI3K-Akt signaling pathway	map04151
		Cell cycle	map04110
		Oocyte meiosis	map04114
		NOD-like receptor signaling pathway	map04621
		Neurotrophin signaling pathway	map04722

Gene Ontology

GO term	Ontology	Name
GO:0019904	molecular_function	protein domain specific binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	271.434
	SRR3591706	second leaf	156.346
	SRR3591707	mature leaf	123.832
	SRR3591708	Shoot apex	244.174
	SRR3591709	Stem	207.965
	SRR3591710	White floral bud	160.080
	SRR3591711	White flower	236.892
	SRR3591712	Green floral bud	211.935
	SRR3591713	Yellow flower	352.520
SRP173429	SRR8316895	Juvenile bud stage	196.481
	SRR8316896	Juvenile bud stage	268.003
	SRR8316897	Juvenile bud stage	106.936
	SRR8316894	Third green stage	102.131
	SRR8316900	Third green stage	280.878
	SRR8316901	Third green stage	293.963
	SRR8316898	Complete white stage	119.762
	SRR8316899	Complete white stage	439.288
	SRR8316903	Complete white stage	181.737
	SRR8316902	Silver flowering stage	95.357
	SRR8316904	Silver flowering stage	107.321
	SRR8316905	Silver flowering stage	58.843
	SRR8316906	Gold flowering stage	238.598
	SRR8316907	Gold flowering stage	228.126
	SRR8316908	Gold flowering stage	227.176
SRP132670	SRR6706286	Control	368.084
	SRR6706287	Light intensity 50%	376.314
	SRR6706288	Light intensity 20%	384.539
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	299.281
	CNS0095593	Slightly white alabastrum(diploid) 2	333.609
	CNS0095594	Slightly white alabastrum(diploid) 3	282.015
	CNS0095595	Whole white alabastrum(diploid) 2	282.313
	CNS0095596	Whole white alabastrum(diploid) 3	278.765
	CNS0095597	Whole white alabastrum(diploid) 4	263.441
	CNS0095598	Silvery flower (diploied) 1	254.525
	CNS0095599	Silvery flower (diploied) 2	220.047
	CNS0095600	Silvery flower (diploied) 3	317.621
	CNS0095601	Golden flower (diploid) 1	272.654
	CNS0095602	Golden flower (diploid) 2	399.473
	CNS0095603	Golden flower (diploid) 3	390.344
	CNS0095604	Slightly white alabastrum(tetraploid) 1	418.930
	CNS0095605	Slightly white alabastrum(tetraploid) 2	396.158
	CNS0095606	Slightly white alabastrum(tetraploid) 3	596.230
	CNS0095607	Whole white alabastrum(tetraploid) 1	290.541
	CNS0095608	Whole white alabastrum(tetraploid) 2	266.100
	CNS0095609	Whole white alabastrum(tetraploid) 3	428.262
	CNS0095610	Silvery flower (tetraploid) 1	525.319
	CNS0095611	Silvery flower (tetraploid) 2	532.016
	CNS0095612	Silvery flower (tetraploid) 3	473.029
	CNS0095613	Golden flower (tetraploid) 1	485.844
	CNS0095614	Golden flower (tetraploid) 2	638.935
	CNS0095615	Golden flower (tetraploid) 3	675.541
CRA001975	CRR073297	Stem 1	385.134
	CRR073298	Stem 2	401.754
	CRR073299	Stem 3	435.034
	CRR073300	Leaf 1	489.338
	CRR073301	Leaf 2	514.019
	CRR073302	Leaf 3	471.955
	CRR073303	Juvenile bud 1	525.680
	CRR073304	Juvenile bud 2	437.607
	CRR073305	Juvenile bud 3	575.275
	CRR073306	Third green 1	327.907
	CRR073307	Third green 2	291.461
	CRR073308	Third green 3	294.959
	CRR073309	Second white 1	349.613
	CRR073310	Second white 2	265.681
	CRR073311	Second white 3	207.000
	CRR073312	Silver flowering 1	234.507
	CRR073313	Silver flowering 2	287.076
	CRR073314	Silver flowering 3	155.380
	CRR073315	Gold flowering 1	321.379
	CRR073316	Gold flowering 2	335.907
	CRR073317	Gold flowering 3	339.809
	CRR073318	Tawny withering 1	420.262
	CRR073319	Tawny withering 2	328.488
	CRR073320	Tawny withering 3	397.712