Gene detail

Detail information of GWHGAAZE007429

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CDP02034.1	0	unnamed protein product [Coffea canephora]
trEMBL	tr\|A0A068U1I6\|A0A068U1I6_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_7 {ECO:0000313\|EMBL:CDP02034.1}
TAIR10	AT2G25737.1	6E-120	Sulfite exporter TauE/SafE family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	45209554	45214883	+
GWHAAZE00000002	mRNA	45209554	45214883	+
GWHAAZE00000002	exon	45209554	45209871	+
GWHAAZE00000002	exon	45210101	45210260	+
GWHAAZE00000002	exon	45210380	45210580	+
GWHAAZE00000002	exon	45211224	45211288	+
GWHAAZE00000002	exon	45211401	45211440	+
GWHAAZE00000002	exon	45211878	45211933	+
GWHAAZE00000002	exon	45212069	45212155	+
GWHAAZE00000002	exon	45212440	45212490	+
GWHAAZE00000002	exon	45213001	45213222	+
GWHAAZE00000002	exon	45213745	45213838	+
GWHAAZE00000002	exon	45213992	45214132	+
GWHAAZE00000002	exon	45214524	45214883	+
GWHAAZE00000002	five_prime_UTR	45209554	45209643	+
GWHAAZE00000002	CDS	45209644	45209871	+
GWHAAZE00000002	CDS	45210101	45210260	+
GWHAAZE00000002	CDS	45210380	45210580	+
GWHAAZE00000002	CDS	45211224	45211288	+
GWHAAZE00000002	CDS	45211401	45211440	+
GWHAAZE00000002	CDS	45211878	45211933	+
GWHAAZE00000002	CDS	45212069	45212155	+
GWHAAZE00000002	CDS	45212440	45212490	+
GWHAAZE00000002	CDS	45213001	45213222	+
GWHAAZE00000002	CDS	45213745	45213838	+
GWHAAZE00000002	CDS	45213992	45214132	+
GWHAAZE00000002	CDS	45214524	45214606	+
GWHAAZE00000002	three_prime_UTR	45214607	45214883	+

Transcript Sequence
>GWHTAAZE007437 GCATTGTATATAATACATATCACCCAAACTACATATATAAACACATATATAGTGCTAAGCCACTTTAGTAAGAGCTAGCTAGCTACATATATGGGTCGAACCAGGGTGAACCATACGGCTAAGGCGCTGGCCACAATGGTGGCATGGGCGGTCTGTTGGGGCCTTTTTACGGTGAGTGGTGTGGGTAGTGCCGAACGAATATTGAGAGCCACCGAGCCGGGGTACGTTGTTGAGAAAGAAATGAGACAAGGGTTTGTAGTGCAAGTTCTTCATTTCTTATGGCAGAGTGGAAAATCATCTTATCAACCCGTTTGGCCGGATATGGAGTTTGGATGGAGACTAGTGCTAGGAACAATAATCGGGTTCCTGGGTGCAGGTCTAGGGAGCGTCGGTGGGGTTGGCGGTGGTGGAATATTTGTTCCGATGCTCAGTTTGATCATTGGCTTCGACCCCAAGTCTTCTACTGCCATTTCTAAATGTATGATCATGGGTGCTGCGGGATCAACAGTGTATTATAATCTGAAACTAAGGCACCCGACGCTTGATATGCCCTTGATAGACTATGACTTAGCGTTGCTGTTTCAACCGATGCTTATGCTCGGTATAAGCATTGGAGTTGCTTTCAATGTCATCTTCGCGGATTGGATGGTCACTGTTCTCCTCATTATCCTCTTCATAGGTACATCAACTAAAGCGCTGTTCAAAGGCATAGATACGTGGAAGAAAGAGACATTGATGAAAAAGGAAGCAGTAAAGCTGTTGGAATCAGAGTCCAAACCAGTTGGAGAAGAATACAAACGGCTACCAAGCGGTCCAGCTGCTTCTGCTGAGGGAGAAGAGGTTCCGATGATTTACAACATTTGCTGGAAGGAACTCACGCTGTTAGTGCTTGTGTGGGTAGCTTTCCTTGCTGTGCAGGTTCTGAAGACGTACACTGTAACCTGTTCTGTCAACTACTGGATTCTGAACTCCTTGCAGGTCCCGATAGCCGTCTCTGTGTCGCTTTACGAAGCCATATGTCTATACAAAGGCACCAGGGTGATTGCATCCAAAGGAAAGGATTTAACACACTGGAAGGCGCATCAACTTTTCTTCTATTGCTGCTGTGGAATAATAGCTGGTGTGGTGGGAGGATTGCTTGGGCTAGGAGGTGGCTTCATCTTGGGACCCCTTTTCCTAGAACTGGGAATTCCCCCTCAGGTCGCAAGCGCAACATCAAGTTTTGCAATGGTCTTCTCATCCTCCATGTCAGTTGTACAATATTACCTTCTGAAGCGTTTCCCAGTCCCCTATGCTGCCTATCTTGTTTTAGTTGCTACAATTGCTGCTTTTGCTGGTCAGCACATAGTGAGGAGGATTATTGCTTTACTTGGCAGGGCATCCATAATCATCTTCATTTTGGCTTTGACTATCTTTGTGAGCGCAATCAGTTTAGGCGGAGTGGGGATAGCACATATGATTGAGAAGCTGGAGAATCAAGAGTACATGGGGTTTGATAGTCTTTGTTACAACTCCTAAAATATGCTTTAAACTATCATCATATCAGATTGGAATCAAAGAACAAAGGATAACTATATCCAAGCTACGTTACCTTGCAAGATGAACTATTTTTCCATTTGTTTTCGAGCAGAGATCATATATAAATTATTTTGTGTTTTTATGTATATTTACAAATTTCTTATACCAGGTTATGTTTTGTTGGCCTTATGAGCAGTGATCACTCTATAAAGAACTTGGTACTCAGCTTCAACATAGTATTTTTGAAGATATCACTTAAAAGAAATGGAGTATTTTT

Network for GWHGAAZE007429

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0278

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01925.20	TauE	89	206	4.10E-08
PF01925.20	TauE	338	443	3.80E-13

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016021	cellular_component	integral component of membrane

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	3.779
	SRR3591706	second leaf	30.700
	SRR3591707	mature leaf	18.532
	SRR3591708	Shoot apex	7.873
	SRR3591709	Stem	49.640
	SRR3591710	White floral bud	18.264
	SRR3591711	White flower	23.477
	SRR3591712	Green floral bud	4.494
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	16.796
	SRR8316896	Juvenile bud stage	5.222
	SRR8316897	Juvenile bud stage	1.685
	SRR8316894	Third green stage	5.905
	SRR8316900	Third green stage	3.633
	SRR8316901	Third green stage	3.631
	SRR8316898	Complete white stage	0.076
	SRR8316899	Complete white stage	5.561
	SRR8316903	Complete white stage	6.724
	SRR8316902	Silver flowering stage	0.022
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.023
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	4.427
	SRR6706287	Light intensity 50%	5.951
	SRR6706288	Light intensity 20%	5.874
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	8.110
	CNS0095593	Slightly white alabastrum(diploid) 2	8.823
	CNS0095594	Slightly white alabastrum(diploid) 3	10.393
	CNS0095595	Whole white alabastrum(diploid) 2	7.440
	CNS0095596	Whole white alabastrum(diploid) 3	3.414
	CNS0095597	Whole white alabastrum(diploid) 4	3.723
	CNS0095598	Silvery flower (diploied) 1	51.965
	CNS0095599	Silvery flower (diploied) 2	17.977
	CNS0095600	Silvery flower (diploied) 3	8.319
	CNS0095601	Golden flower (diploid) 1	10.066
	CNS0095602	Golden flower (diploid) 2	14.847
	CNS0095603	Golden flower (diploid) 3	15.071
	CNS0095604	Slightly white alabastrum(tetraploid) 1	10.329
	CNS0095605	Slightly white alabastrum(tetraploid) 2	2.498
	CNS0095606	Slightly white alabastrum(tetraploid) 3	63.736
	CNS0095607	Whole white alabastrum(tetraploid) 1	10.773
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.056
	CNS0095610	Silvery flower (tetraploid) 1	0.038
	CNS0095611	Silvery flower (tetraploid) 2	12.213
	CNS0095612	Silvery flower (tetraploid) 3	1.401
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.023
	CNS0095615	Golden flower (tetraploid) 3	0.182
CRA001975	CRR073297	Stem 1	16.961
	CRR073298	Stem 2	8.028
	CRR073299	Stem 3	6.139
	CRR073300	Leaf 1	1.767
	CRR073301	Leaf 2	1.881
	CRR073302	Leaf 3	2.698
	CRR073303	Juvenile bud 1	0.245
	CRR073304	Juvenile bud 2	0.057
	CRR073305	Juvenile bud 3	0.204
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.061
	CRR073308	Third green 3	0.072
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.026
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.045
	CRR073313	Silver flowering 2	0.047
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	11.614
	CRR073316	Gold flowering 2	20.038
	CRR073317	Gold flowering 3	20.267
	CRR073318	Tawny withering 1	1.960
	CRR073319	Tawny withering 2	2.090
	CRR073320	Tawny withering 3	3.616