Gene detail

Detail information of GWHGAAZE007585

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007202250.1	0	hypothetical protein PRUPE_ppa008831mg [Prunus persica]
Swissprot	tr\|Q43872\|PER64_ARATH	1E-160	Peroxidase 64 (Precursor)
trEMBL	tr\|M5VQB1\|M5VQB1_PRUPE	0	Uncharacterized protein {ECO:0000313\|EMBL:EMJ03449.1}
TAIR10	AT5G42180.1	2E-125	Peroxidase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	48231903	48233556	-
GWHAAZE00000002	mRNA	48231903	48233556	-
GWHAAZE00000002	exon	48231903	48232297	-
GWHAAZE00000002	exon	48232753	48232915	-
GWHAAZE00000002	exon	48233073	48233261	-
GWHAAZE00000002	exon	48233353	48233556	-
GWHAAZE00000002	CDS	48233353	48233556	-
GWHAAZE00000002	CDS	48233073	48233261	-
GWHAAZE00000002	CDS	48232753	48232915	-
GWHAAZE00000002	CDS	48231903	48232297	-

Transcript Sequence
>GWHTAAZE007593 ATGGCTATCATCTTTGCATTTTTAAACACCCTCCTAATCCTCTCACTCTCTTCACAAGTGAACTCGCTGAGTTCAAACTACTATGACAAGACATGTCCCAACGTCGAGTCGATCGTCACAAATGCAGTCAAGAGCGCACTGGCAAATGACCAAAAGGTCCCCGCTGCAATCCTGAGGATGCACTTCCACGATTGTTTCATAAGGGGATGTGATGCCTCGGTGCTATTAAATTCAGTCGGGAAGAACACAGCAGAAAAAGATGGGCCACCTAATGTCTCTTTGCATGCATTTTATGTAATTGAGGCCGCAAAGAAGCAAGTTGAGGCCTTGTGCCCTGGCATAGTCTCATGCGCAGATATCCTGGCTTTAGCTGCAAGAGATTCAGTTGTCCTGTCGGGAGGACCAAGTTGGGATGTGCCGAAAGGAAGAAAAGATGGAAGAACATCATTAGCGACTGAAACTAGACAATTGCCGGCTCCTACCTTCAACATATCTCAACTTCAACAAAGCTTCTCTCAAAGAGGATTGTCCATGGAAGACCTAGTTGCACTCTCAGGCGGGCACACCCTAGGTTTCTCCCACTGCTCGTCCTTTAACAACAGAATCCACAACTTCAACGCAAGCCATGATGTTGACCCTTCGTTGCATCCATCTTTGGCCTCGAGCTTGAAGAGCATTTGCCCTGTCAACAACAAGGCAAAGAACGCAGGGACCACCATGGACCCTTCACCAACAACGTTCGATAACAACTACTACAAGCTGATCCTACAGGGGAAGAGCCTCTTTTCTTCGGACCAAGCTTTGCTCACTTCACCTAAGACCAAAGGCTTGGTTACTAAGTTTGCTAGCTCACGTGAAGCTTTCTCTAAGGCTTTTGTTAAGTCTATGATCAAGATGAGCAGCCTCAATGGTGGCCAGGAGGTCAGAAAGGATTGTAGGGTGGTAAATTGA

Network for GWHGAAZE007585

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00141.24	peroxidase	40	284	9.40E-76

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00430	E1.11.1.7	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Phenylpropanoid biosynthesis	map00940

Gene Ontology

GO term	Ontology	Name
GO:0006979	biological_process	response to oxidative stress
GO:0055114	biological_process	oxidation-reduction process
GO:0042744	biological_process	hydrogen peroxide catabolic process
GO:0004601	molecular_function	peroxidase activity
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	513.375
	SRR3591706	second leaf	0.598
	SRR3591707	mature leaf	0.139
	SRR3591708	Shoot apex	0.553
	SRR3591709	Stem	83.832
	SRR3591710	White floral bud	0.104
	SRR3591711	White flower	0.389
	SRR3591712	Green floral bud	0.155
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.046
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.053
	SRR8316900	Third green stage	0.847
	SRR8316901	Third green stage	0.127
	SRR8316898	Complete white stage	1.543
	SRR8316899	Complete white stage	6.692
	SRR8316903	Complete white stage	2.507
	SRR8316902	Silver flowering stage	0.077
	SRR8316904	Silver flowering stage	0.039
	SRR8316905	Silver flowering stage	0.046
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.523
SRP132670	SRR6706286	Control	0.218
	SRR6706287	Light intensity 50%	0.329
	SRR6706288	Light intensity 20%	0.134
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.078
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.090
	CNS0095600	Silvery flower (diploied) 3	0.548
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.093
	CNS0095603	Golden flower (diploid) 3	0.264
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.062
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.268
	CNS0095610	Silvery flower (tetraploid) 1	0.064
	CNS0095611	Silvery flower (tetraploid) 2	0.146
	CNS0095612	Silvery flower (tetraploid) 3	0.072
	CNS0095613	Golden flower (tetraploid) 1	0.038
	CNS0095614	Golden flower (tetraploid) 2	0.156
	CNS0095615	Golden flower (tetraploid) 3	0.072
CRA001975	CRR073297	Stem 1	0.099
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.590
	CRR073300	Leaf 1	0.084
	CRR073301	Leaf 2	0.138
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.244
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	1.230
	CRR073306	Third green 1	0.351
	CRR073307	Third green 2	0.108
	CRR073308	Third green 3	0.600
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.066
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.181
	CRR073318	Tawny withering 1	81.525
	CRR073319	Tawny withering 2	29.465
	CRR073320	Tawny withering 3	112.890