Gene detail

Detail information of GWHGAAZE007711

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CDP01734.1	1.2971E-167	unnamed protein product [Coffea canephora]
Swissprot	tr\|Q9ZV87\|NAPES_ARATH	9E-135	N-acylphosphatidylethanolamine synthase
trEMBL	tr\|A0A068U0Q8\|A0A068U0Q8_COFCA	5E-168	Coffea canephora DH200=94 genomic scaffold, scaffold_7 {ECO:0000313\|EMBL:CDP01734.1}
TAIR10	AT1G78690.1	6E-108	Phospholipid/glycerol acyltransferase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	50787359	50792688	-
GWHAAZE00000002	mRNA	50787359	50792688	-
GWHAAZE00000002	exon	50792477	50792688	-
GWHAAZE00000002	exon	50791097	50791224	-
GWHAAZE00000002	exon	50790295	50790380	-
GWHAAZE00000002	exon	50788808	50788945	-
GWHAAZE00000002	exon	50787359	50787646	-
GWHAAZE00000002	CDS	50792477	50792688	-
GWHAAZE00000002	CDS	50791097	50791224	-
GWHAAZE00000002	CDS	50790295	50790380	-
GWHAAZE00000002	CDS	50788808	50788945	-
GWHAAZE00000002	CDS	50787359	50787646	-

Transcript Sequence
>GWHTAAZE007719 ATGATGGGGAGGAAGATGGAGTGGGCAGCTAAAGGGAACCATTTAGGAGGGATACCGAGGAAAATGACGATAATGGCAGTGGGCACATTCGCTAAAGCAGTCGCCAATCTCCTAAATACAACCACCGTTCAAAATGCCGAAACCCTAATCCGCCTCGTCCGATCTCGACCTCCCGGCGTTCCCCTCCTTACCGTCAGCAACCACATGTCCACGTTAGATGACCCGGTCATGTGGGGATTTAAAGGTTTTCCCATAACTGACGCAAAATTGGCACGATGGGTACTTGCTGCTGAAGACATATGCTTTAAAAATACGGTGCTGTCATACTTTTTCCGACTTGGAAAATGTATACCCATAACCAGAGGTGGTGGAATTTATCAGGAACACATGAATGAAGCTCTTGATCGACTAAGGGATGGATCATGGTTACATACATTTCCAGAGGGAAAAGTGTGTCAAGAAGATGCACCAATAAGACGATTAAAGTGGGGAACTGCCAGTCTCATTGCTCGGGCTCCTGTAACCCCAATAGTTTTGCCAATTGTCCATCACGGTTTTGATAAGGTGATGCCGGAAAATTACGCGTTTGGCAGAAGGCCGCCTTTCCCACTGTGTAGGAAGAACATAAAAATAATAGTTGGTGAGCCAATAGAGTTCGACCTTCTTAAAATGAAGCAGATGGCTCTGTCCACATCTAAGGATTCATCCATACGCATTGATGGGTGGCCGAGTACTACCCCTTGTGGACTCAATCAGGCAGCACAACGACATCTGTACACCACTATATCGGAGAAAATTCGAATGGTCATGGAGCGGATAAGGGTTTTAAGCAAAACTCATTTGAAGCTCTAA

Network for GWHGAAZE007711

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01553.22	Acyltransferase	42	183	3.60E-21

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K13511	TAZ	Glycerophospholipid metabolism	map00564

Gene Ontology

GO term	Ontology	Name
GO:0006644	biological_process	phospholipid metabolic process
GO:0016746	molecular_function	transferase activity, transferring acyl groups

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	7.664
	SRR3591706	second leaf	5.032
	SRR3591707	mature leaf	5.514
	SRR3591708	Shoot apex	13.145
	SRR3591709	Stem	10.196
	SRR3591710	White floral bud	8.386
	SRR3591711	White flower	8.303
	SRR3591712	Green floral bud	11.748
	SRR3591713	Yellow flower	10.186
SRP173429	SRR8316895	Juvenile bud stage	10.879
	SRR8316896	Juvenile bud stage	13.439
	SRR8316897	Juvenile bud stage	7.017
	SRR8316894	Third green stage	5.145
	SRR8316900	Third green stage	13.303
	SRR8316901	Third green stage	14.819
	SRR8316898	Complete white stage	4.761
	SRR8316899	Complete white stage	16.876
	SRR8316903	Complete white stage	5.769
	SRR8316902	Silver flowering stage	3.858
	SRR8316904	Silver flowering stage	4.056
	SRR8316905	Silver flowering stage	2.411
	SRR8316906	Gold flowering stage	9.903
	SRR8316907	Gold flowering stage	9.027
	SRR8316908	Gold flowering stage	14.617
SRP132670	SRR6706286	Control	13.568
	SRR6706287	Light intensity 50%	12.571
	SRR6706288	Light intensity 20%	12.788
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	14.072
	CNS0095593	Slightly white alabastrum(diploid) 2	12.782
	CNS0095594	Slightly white alabastrum(diploid) 3	13.782
	CNS0095595	Whole white alabastrum(diploid) 2	12.917
	CNS0095596	Whole white alabastrum(diploid) 3	16.310
	CNS0095597	Whole white alabastrum(diploid) 4	10.243
	CNS0095598	Silvery flower (diploied) 1	10.751
	CNS0095599	Silvery flower (diploied) 2	5.933
	CNS0095600	Silvery flower (diploied) 3	8.190
	CNS0095601	Golden flower (diploid) 1	8.513
	CNS0095602	Golden flower (diploid) 2	9.575
	CNS0095603	Golden flower (diploid) 3	6.673
	CNS0095604	Slightly white alabastrum(tetraploid) 1	14.300
	CNS0095605	Slightly white alabastrum(tetraploid) 2	17.145
	CNS0095606	Slightly white alabastrum(tetraploid) 3	17.351
	CNS0095607	Whole white alabastrum(tetraploid) 1	17.231
	CNS0095608	Whole white alabastrum(tetraploid) 2	14.844
	CNS0095609	Whole white alabastrum(tetraploid) 3	17.749
	CNS0095610	Silvery flower (tetraploid) 1	8.129
	CNS0095611	Silvery flower (tetraploid) 2	9.085
	CNS0095612	Silvery flower (tetraploid) 3	9.647
	CNS0095613	Golden flower (tetraploid) 1	7.077
	CNS0095614	Golden flower (tetraploid) 2	8.470
	CNS0095615	Golden flower (tetraploid) 3	6.813
CRA001975	CRR073297	Stem 1	10.159
	CRR073298	Stem 2	11.059
	CRR073299	Stem 3	8.702
	CRR073300	Leaf 1	11.489
	CRR073301	Leaf 2	10.502
	CRR073302	Leaf 3	7.000
	CRR073303	Juvenile bud 1	5.618
	CRR073304	Juvenile bud 2	4.584
	CRR073305	Juvenile bud 3	6.407
	CRR073306	Third green 1	1.798
	CRR073307	Third green 2	2.346
	CRR073308	Third green 3	2.529
	CRR073309	Second white 1	1.733
	CRR073310	Second white 2	0.931
	CRR073311	Second white 3	1.411
	CRR073312	Silver flowering 1	1.021
	CRR073313	Silver flowering 2	2.301
	CRR073314	Silver flowering 3	0.933
	CRR073315	Gold flowering 1	2.561
	CRR073316	Gold flowering 2	3.410
	CRR073317	Gold flowering 3	2.886
	CRR073318	Tawny withering 1	4.277
	CRR073319	Tawny withering 2	6.913
	CRR073320	Tawny withering 3	6.568