Detail information of GWHGAAZE007721


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008368725.13.1347E-112PREDICTED: glutathione S-transferase F12-like [Malus domestica]
Swissprottr|Q9FE46|GSTFC_ARATH8E-84Glutathione S-transferase F12
trEMBLtr|G3LX80|G3LX80_MALDO1E-112GST-like protein {ECO:0000313|EMBL:AEN84869.1}
TAIR10AT5G17220.12E-67glutathione S-transferase phi 12

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene5109924351101080-
GWHAAZE00000002mRNA5109924351101080-
GWHAAZE00000002exon5109924351099688-
GWHAAZE00000002exon5110041051100458-
GWHAAZE00000002exon5110093451101080-
GWHAAZE00000002CDS5110093451101080-
GWHAAZE00000002CDS5110041051100458-
GWHAAZE00000002CDS5109924351099688-
Transcript Sequence

Network for GWHGAAZE007721

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02798.21GST_N1732.10E-17
PF00043.26GST_C1142021.30E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.990
SRR3591706second leaf0.490
SRR3591707mature leaf0.388
SRR3591708Shoot apex1.885
SRR3591709Stem5.088
SRR3591710White floral bud1.729
SRR3591711White flower0.503
SRR3591712Green floral bud18.961
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 4.025
SRR8316896Juvenile bud stage 1.946
SRR8316897Juvenile bud stage 1.349
SRR8316894Third green stage 0.285
SRR8316900Third green stage 1.194
SRR8316901Third green stage 0.556
SRR8316898Complete white stage 1.535
SRR8316899Complete white stage 0.493
SRR8316903Complete white stage 1.187
SRR8316902Silver flowering stage0.513
SRR8316904Silver flowering stage1.171
SRR8316905Silver flowering stage0.829
SRR8316906Gold flowering stage 3.916
SRR8316907Gold flowering stage 3.419
SRR8316908Gold flowering stage 7.947
SRP132670SRR6706286Control0.531
SRR6706287Light intensity 50%0.560
SRR6706288Light intensity 20%0.419
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.298
CNS0095593Slightly white alabastrum(diploid) 20.082
CNS0095594Slightly white alabastrum(diploid) 32.181
CNS0095595Whole white alabastrum(diploid) 20.137
CNS0095596Whole white alabastrum(diploid) 30.518
CNS0095597Whole white alabastrum(diploid) 40.358
CNS0095598Silvery flower (diploied) 11.271
CNS0095599Silvery flower (diploied) 20.157
CNS0095600Silvery flower (diploied) 31.779
CNS0095601Golden flower (diploid) 10.704
CNS0095602Golden flower (diploid) 20.132
CNS0095603Golden flower (diploid) 30.308
CNS0095604Slightly white alabastrum(tetraploid) 11.327
CNS0095605Slightly white alabastrum(tetraploid) 20.465
CNS0095606Slightly white alabastrum(tetraploid) 30.237
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.500
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.200
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.025
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 15.027
CRR073298Stem 22.135
CRR073299Stem 31.884
CRR073300Leaf 10.499
CRR073301Leaf 20.347
CRR073302Leaf 30.177
CRR073303Juvenile bud 12.546
CRR073304Juvenile bud 21.429
CRR073305Juvenile bud 36.606
CRR073306Third green 10.846
CRR073307Third green 21.444
CRR073308Third green 30.742
CRR073309Second white 11.099
CRR073310Second white 22.265
CRR073311Second white 30.231
CRR073312Silver flowering 10.534
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.156
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 13.569
CRR073319Tawny withering 20.312
CRR073320Tawny withering 34.245