Detail information of GWHGAAZE007750


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006372549.14.09951E-74hypothetical protein POPTR_0017s02700g [Populus trichocarpa]
trEMBLtr|U5FK86|U5FK86_POPTR2E-74Uncharacterized protein {ECO:0000313|EMBL:ERP50346.1}
TAIR10AT5G16940.23E-48carbon-sulfur lyases

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene5177767551778127+
GWHAAZE00000002mRNA5177767551778127+
GWHAAZE00000002exon5177767551778127+
GWHAAZE00000002CDS5177767551778127+
Transcript Sequence

Network for GWHGAAZE007750

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0057


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04828.15GFA271086.00E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016846molecular_functioncarbon-sulfur lyase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.092
SRR3591706second leaf5.247
SRR3591707mature leaf6.365
SRR3591708Shoot apex17.848
SRR3591709Stem10.117
SRR3591710White floral bud13.897
SRR3591711White flower11.678
SRR3591712Green floral bud16.899
SRR3591713Yellow flower13.063
SRP173429 SRR8316895Juvenile bud stage 16.658
SRR8316896Juvenile bud stage 14.360
SRR8316897Juvenile bud stage 6.762
SRR8316894Third green stage 7.902
SRR8316900Third green stage 19.297
SRR8316901Third green stage 17.173
SRR8316898Complete white stage 3.266
SRR8316899Complete white stage 26.034
SRR8316903Complete white stage 5.855
SRR8316902Silver flowering stage2.950
SRR8316904Silver flowering stage3.190
SRR8316905Silver flowering stage1.478
SRR8316906Gold flowering stage 8.728
SRR8316907Gold flowering stage 5.724
SRR8316908Gold flowering stage 15.657
SRP132670SRR6706286Control40.353
SRR6706287Light intensity 50%39.675
SRR6706288Light intensity 20%38.163
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.134
CNS0095593Slightly white alabastrum(diploid) 221.963
CNS0095594Slightly white alabastrum(diploid) 313.700
CNS0095595Whole white alabastrum(diploid) 212.448
CNS0095596Whole white alabastrum(diploid) 315.235
CNS0095597Whole white alabastrum(diploid) 414.645
CNS0095598Silvery flower (diploied) 115.549
CNS0095599Silvery flower (diploied) 213.987
CNS0095600Silvery flower (diploied) 38.152
CNS0095601Golden flower (diploid) 116.496
CNS0095602Golden flower (diploid) 214.882
CNS0095603Golden flower (diploid) 310.972
CNS0095604Slightly white alabastrum(tetraploid) 112.658
CNS0095605Slightly white alabastrum(tetraploid) 216.292
CNS0095606Slightly white alabastrum(tetraploid) 320.914
CNS0095607Whole white alabastrum(tetraploid) 19.101
CNS0095608Whole white alabastrum(tetraploid) 211.000
CNS0095609Whole white alabastrum(tetraploid) 312.644
CNS0095610Silvery flower (tetraploid) 111.021
CNS0095611Silvery flower (tetraploid) 212.315
CNS0095612Silvery flower (tetraploid) 36.829
CNS0095613Golden flower (tetraploid) 16.927
CNS0095614Golden flower (tetraploid) 210.408
CNS0095615Golden flower (tetraploid) 31.508
CRA001975CRR073297Stem 121.411
CRR073298Stem 220.664
CRR073299Stem 315.310
CRR073300Leaf 122.325
CRR073301Leaf 219.128
CRR073302Leaf 321.253
CRR073303Juvenile bud 118.382
CRR073304Juvenile bud 214.495
CRR073305Juvenile bud 315.664
CRR073306Third green 11.047
CRR073307Third green 21.269
CRR073308Third green 33.934
CRR073309Second white 14.590
CRR073310Second white 21.824
CRR073311Second white 31.451
CRR073312Silver flowering 13.486
CRR073313Silver flowering 23.068
CRR073314Silver flowering 31.857
CRR073315Gold flowering 119.912
CRR073316Gold flowering 225.107
CRR073317Gold flowering 320.762
CRR073318Tawny withering 116.026
CRR073319Tawny withering 219.822
CRR073320Tawny withering 319.458