Detail information of GWHGAAZE007930


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009615501.10PREDICTED: cytochrome P450 86B1-like [Nicotiana tomentosiformis]
Swissprottr|Q9FVS9|C96AF_ARATH3E-161Alkane hydroxylase MAH1 {ECO:0000303|PubMed:17905869}
trEMBLtr|A0A068UZ16|A0A068UZ16_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_71 {ECO:0000313|EMBL:CDP12888.1}
TAIR10AT4G39490.12E-162cytochrome P450, family 96, subfamily A, polypeptide 10

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene5666887456672607-
GWHAAZE00000002mRNA5666887456672607-
GWHAAZE00000002exon5666887456669194-
GWHAAZE00000002exon5667005456670520-
GWHAAZE00000002exon5667197156672607-
GWHAAZE00000002CDS5667197156672607-
GWHAAZE00000002CDS5667005456670520-
GWHAAZE00000002CDS5666887456669194-
Transcript Sequence

Network for GWHGAAZE007930

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.23p45094553.80E-63
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0005506molecular_functioniron ion binding
GO:0016705molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.279
SRR3591706second leaf1.661
SRR3591707mature leaf0.228
SRR3591708Shoot apex6.820
SRR3591709Stem14.104
SRR3591710White floral bud4.278
SRR3591711White flower0.552
SRR3591712Green floral bud4.006
SRR3591713Yellow flower0.404
SRP173429 SRR8316895Juvenile bud stage 0.622
SRR8316896Juvenile bud stage 0.475
SRR8316897Juvenile bud stage 1.391
SRR8316894Third green stage 0.142
SRR8316900Third green stage 20.212
SRR8316901Third green stage 4.538
SRR8316898Complete white stage 3.759
SRR8316899Complete white stage 1.227
SRR8316903Complete white stage 5.634
SRR8316902Silver flowering stage7.709
SRR8316904Silver flowering stage16.484
SRR8316905Silver flowering stage11.326
SRR8316906Gold flowering stage 93.035
SRR8316907Gold flowering stage 131.241
SRR8316908Gold flowering stage 60.468
SRP132670SRR6706286Control32.530
SRR6706287Light intensity 50%38.861
SRR6706288Light intensity 20%39.520
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.329
CNS0095594Slightly white alabastrum(diploid) 30.008
CNS0095595Whole white alabastrum(diploid) 20.271
CNS0095596Whole white alabastrum(diploid) 30.223
CNS0095597Whole white alabastrum(diploid) 40.620
CNS0095598Silvery flower (diploied) 10.099
CNS0095599Silvery flower (diploied) 20.229
CNS0095600Silvery flower (diploied) 32.522
CNS0095601Golden flower (diploid) 10.862
CNS0095602Golden flower (diploid) 22.993
CNS0095603Golden flower (diploid) 32.560
CNS0095604Slightly white alabastrum(tetraploid) 10.113
CNS0095605Slightly white alabastrum(tetraploid) 20.278
CNS0095606Slightly white alabastrum(tetraploid) 33.211
CNS0095607Whole white alabastrum(tetraploid) 10.184
CNS0095608Whole white alabastrum(tetraploid) 20.412
CNS0095609Whole white alabastrum(tetraploid) 324.029
CNS0095610Silvery flower (tetraploid) 18.718
CNS0095611Silvery flower (tetraploid) 28.484
CNS0095612Silvery flower (tetraploid) 311.765
CNS0095613Golden flower (tetraploid) 131.428
CNS0095614Golden flower (tetraploid) 227.894
CNS0095615Golden flower (tetraploid) 328.949
CRA001975CRR073297Stem 10.622
CRR073298Stem 20.414
CRR073299Stem 30.321
CRR073300Leaf 11.009
CRR073301Leaf 20.847
CRR073302Leaf 31.122
CRR073303Juvenile bud 10.020
CRR073304Juvenile bud 20.623
CRR073305Juvenile bud 30.095
CRR073306Third green 11.074
CRR073307Third green 20.525
CRR073308Third green 30.513
CRR073309Second white 131.523
CRR073310Second white 28.280
CRR073311Second white 312.583
CRR073312Silver flowering 12.845
CRR073313Silver flowering 20.541
CRR073314Silver flowering 32.806
CRR073315Gold flowering 10.276
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.041
CRR073318Tawny withering 13.367
CRR073319Tawny withering 28.009
CRR073320Tawny withering 36.541