Detail information of GWHGAAZE008132


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAHB32108.10dihydropyrimidinase-like protein [Camellia sinensis]
Swissprottr|B9FDB8|ALN_ORYSJ1E-21Probable allantoinase
trEMBLtr|V5RA70|V5RA70_CAMSI0Dihydropyrimidinase-like protein {ECO:0000313|EMBL:AHB32108.1}
TAIR10AT5G12200.10pyrimidine 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene6227836762294451-
GWHAAZE00000002mRNA6227836762294451-
GWHAAZE00000002exon6229426662294451-
GWHAAZE00000002exon6229207162292122-
GWHAAZE00000002exon6229082162291120-
GWHAAZE00000002exon6229050562290758-
GWHAAZE00000002exon6228905362289173-
GWHAAZE00000002exon6228759062287677-
GWHAAZE00000002exon6228719562287273-
GWHAAZE00000002exon6228645262286539-
GWHAAZE00000002exon6228629862286338-
GWHAAZE00000002exon6228614462286196-
GWHAAZE00000002exon6228533562285491-
GWHAAZE00000002exon6227836762278558-
GWHAAZE00000002CDS6229426662294451-
GWHAAZE00000002CDS6229207162292122-
GWHAAZE00000002CDS6229082162291120-
GWHAAZE00000002CDS6229050562290758-
GWHAAZE00000002CDS6228905362289173-
GWHAAZE00000002CDS6228759062287677-
GWHAAZE00000002CDS6228719562287273-
GWHAAZE00000002CDS6228645262286539-
GWHAAZE00000002CDS6228629862286338-
GWHAAZE00000002CDS6228614462286196-
GWHAAZE00000002CDS6228533562285491-
GWHAAZE00000002CDS6227836762278558-
Transcript Sequence

Network for GWHGAAZE008132

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01979.21Amidohydro_12054866.90E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01464DPYS, dht, hydA Metabolic pathways map01100
Pyrimidine metabolismmap00240
beta-Alanine metabolismmap00410
Pantothenate and CoA biosynthesismap00770
Drug metabolism - other enzymesmap00983

Gene Ontology

GO term OntologyName
GO:0005737cellular_componentcytoplasm
GO:0016787molecular_functionhydrolase activity
GO:0016810molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.017
SRR3591706second leaf0.962
SRR3591707mature leaf1.335
SRR3591708Shoot apex6.904
SRR3591709Stem10.858
SRR3591710White floral bud5.032
SRR3591711White flower6.328
SRR3591712Green floral bud3.126
SRR3591713Yellow flower5.052
SRP173429 SRR8316895Juvenile bud stage 8.440
SRR8316896Juvenile bud stage 9.543
SRR8316897Juvenile bud stage 2.594
SRR8316894Third green stage 3.110
SRR8316900Third green stage 6.536
SRR8316901Third green stage 5.880
SRR8316898Complete white stage 1.092
SRR8316899Complete white stage 7.098
SRR8316903Complete white stage 4.886
SRR8316902Silver flowering stage1.710
SRR8316904Silver flowering stage1.857
SRR8316905Silver flowering stage0.953
SRR8316906Gold flowering stage 2.338
SRR8316907Gold flowering stage 2.195
SRR8316908Gold flowering stage 2.823
SRP132670SRR6706286Control11.593
SRR6706287Light intensity 50%8.561
SRR6706288Light intensity 20%8.626
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.578
CNS0095593Slightly white alabastrum(diploid) 28.917
CNS0095594Slightly white alabastrum(diploid) 316.346
CNS0095595Whole white alabastrum(diploid) 28.144
CNS0095596Whole white alabastrum(diploid) 35.630
CNS0095597Whole white alabastrum(diploid) 46.593
CNS0095598Silvery flower (diploied) 120.773
CNS0095599Silvery flower (diploied) 217.555
CNS0095600Silvery flower (diploied) 37.465
CNS0095601Golden flower (diploid) 119.257
CNS0095602Golden flower (diploid) 214.212
CNS0095603Golden flower (diploid) 312.362
CNS0095604Slightly white alabastrum(tetraploid) 110.657
CNS0095605Slightly white alabastrum(tetraploid) 29.572
CNS0095606Slightly white alabastrum(tetraploid) 315.232
CNS0095607Whole white alabastrum(tetraploid) 19.807
CNS0095608Whole white alabastrum(tetraploid) 25.881
CNS0095609Whole white alabastrum(tetraploid) 311.718
CNS0095610Silvery flower (tetraploid) 117.348
CNS0095611Silvery flower (tetraploid) 218.244
CNS0095612Silvery flower (tetraploid) 311.514
CNS0095613Golden flower (tetraploid) 16.517
CNS0095614Golden flower (tetraploid) 29.650
CNS0095615Golden flower (tetraploid) 311.213
CRA001975CRR073297Stem 18.315
CRR073298Stem 26.183
CRR073299Stem 38.865
CRR073300Leaf 15.557
CRR073301Leaf 24.007
CRR073302Leaf 33.796
CRR073303Juvenile bud 12.857
CRR073304Juvenile bud 22.523
CRR073305Juvenile bud 32.583
CRR073306Third green 11.632
CRR073307Third green 21.184
CRR073308Third green 31.377
CRR073309Second white 10.910
CRR073310Second white 20.357
CRR073311Second white 30.696
CRR073312Silver flowering 10.311
CRR073313Silver flowering 20.423
CRR073314Silver flowering 30.743
CRR073315Gold flowering 13.160
CRR073316Gold flowering 24.483
CRR073317Gold flowering 34.824
CRR073318Tawny withering 17.947
CRR073319Tawny withering 26.018
CRR073320Tawny withering 37.457