Detail information of GWHGAAZE008157


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011080354.10PREDICTED: sulfite reductase 1 [ferredoxin], chloroplastic-like [Sesamum indicum]
Swissprottr|O82802|SIR1_TOBAC0Sulfite reductase 1 [ferredoxin], chloroplastic (Precursor)
trEMBLtr|A0A022S0F0|A0A022S0F0_ERYGU0Uncharacterized protein {ECO:0000313|EMBL:EYU46252.1}
TAIR10AT5G04590.10sulfite reductase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene6294362462948630-
GWHAAZE00000002mRNA6294362462948630-
GWHAAZE00000002exon6294362462943809-
GWHAAZE00000002exon6294428562944443-
GWHAAZE00000002exon6294460562944721-
GWHAAZE00000002exon6294482362944957-
GWHAAZE00000002exon6294573662945933-
GWHAAZE00000002exon6294609862946370-
GWHAAZE00000002exon6294645762947239-
GWHAAZE00000002exon6294845762948630-
GWHAAZE00000002CDS6294845762948630-
GWHAAZE00000002CDS6294645762947239-
GWHAAZE00000002CDS6294609862946370-
GWHAAZE00000002CDS6294573662945933-
GWHAAZE00000002CDS6294482362944957-
GWHAAZE00000002CDS6294460562944721-
GWHAAZE00000002CDS6294428562944443-
GWHAAZE00000002CDS6294362462943809-
Transcript Sequence

Network for GWHGAAZE008157

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03460.18NIR_SIR_ferr1251822.60E-16
PF01077.23NIR_SIR2203981.50E-48
PF03460.18NIR_SIR_ferr4114611.60E-10
PF01077.23NIR_SIR4866126.60E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00392sir Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Sulfur metabolismmap00920

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity
GO:0020037molecular_functionheme binding
GO:0051536molecular_functioniron-sulfur cluster binding
GO:0050311molecular_functionsulfite reductase (ferredoxin) activity
GO:0051539molecular_function4 iron, 4 sulfur cluster binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf36.631
SRR3591706second leaf89.823
SRR3591707mature leaf72.744
SRR3591708Shoot apex55.627
SRR3591709Stem29.628
SRR3591710White floral bud43.118
SRR3591711White flower44.724
SRR3591712Green floral bud44.229
SRR3591713Yellow flower34.684
SRP173429 SRR8316895Juvenile bud stage 25.851
SRR8316896Juvenile bud stage 31.112
SRR8316897Juvenile bud stage 16.336
SRR8316894Third green stage 13.017
SRR8316900Third green stage 52.440
SRR8316901Third green stage 37.711
SRR8316898Complete white stage 25.963
SRR8316899Complete white stage 42.709
SRR8316903Complete white stage 34.508
SRR8316902Silver flowering stage13.934
SRR8316904Silver flowering stage20.910
SRR8316905Silver flowering stage11.081
SRR8316906Gold flowering stage 32.079
SRR8316907Gold flowering stage 26.875
SRR8316908Gold flowering stage 36.155
SRP132670SRR6706286Control39.853
SRR6706287Light intensity 50%44.365
SRR6706288Light intensity 20%47.052
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.885
CNS0095593Slightly white alabastrum(diploid) 219.863
CNS0095594Slightly white alabastrum(diploid) 316.897
CNS0095595Whole white alabastrum(diploid) 221.241
CNS0095596Whole white alabastrum(diploid) 321.659
CNS0095597Whole white alabastrum(diploid) 411.501
CNS0095598Silvery flower (diploied) 131.565
CNS0095599Silvery flower (diploied) 228.677
CNS0095600Silvery flower (diploied) 341.940
CNS0095601Golden flower (diploid) 118.779
CNS0095602Golden flower (diploid) 234.712
CNS0095603Golden flower (diploid) 336.000
CNS0095604Slightly white alabastrum(tetraploid) 131.373
CNS0095605Slightly white alabastrum(tetraploid) 227.011
CNS0095606Slightly white alabastrum(tetraploid) 370.380
CNS0095607Whole white alabastrum(tetraploid) 117.263
CNS0095608Whole white alabastrum(tetraploid) 217.766
CNS0095609Whole white alabastrum(tetraploid) 355.813
CNS0095610Silvery flower (tetraploid) 148.263
CNS0095611Silvery flower (tetraploid) 260.518
CNS0095612Silvery flower (tetraploid) 378.467
CNS0095613Golden flower (tetraploid) 123.804
CNS0095614Golden flower (tetraploid) 246.071
CNS0095615Golden flower (tetraploid) 349.078
CRA001975CRR073297Stem 148.944
CRR073298Stem 243.464
CRR073299Stem 350.758
CRR073300Leaf 139.867
CRR073301Leaf 238.156
CRR073302Leaf 345.590
CRR073303Juvenile bud 157.074
CRR073304Juvenile bud 242.383
CRR073305Juvenile bud 362.532
CRR073306Third green 114.876
CRR073307Third green 211.685
CRR073308Third green 314.262
CRR073309Second white 148.208
CRR073310Second white 232.127
CRR073311Second white 339.824
CRR073312Silver flowering 129.556
CRR073313Silver flowering 231.168
CRR073314Silver flowering 321.490
CRR073315Gold flowering 144.042
CRR073316Gold flowering 263.792
CRR073317Gold flowering 355.844
CRR073318Tawny withering 139.243
CRR073319Tawny withering 225.934
CRR073320Tawny withering 333.120