Detail information of GWHGAAZE008195


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO49081.12.70938E-55hypothetical protein CISIN_1g0083791mg, partial [Citrus sinensis]
trEMBLtr|A0A067EDV1|A0A067EDV1_CITSI1E-55Uncharacterized protein {ECO:0000313|EMBL:KDO49081.1} (Fragment)
TAIR10AT1G80930.13E-50MIF4G domain-containing protein / MA3 domain-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene6477808764782256-
GWHAAZE00000002mRNA6477808764782256-
GWHAAZE00000002exon6478205364782256-
GWHAAZE00000002exon6477808764778272-
GWHAAZE00000002CDS6478205364782256-
GWHAAZE00000002CDS6477808764778272-
Transcript Sequence

Network for GWHGAAZE008195

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0045


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02847.18MA3371115.90E-22
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf28.637
SRR3591706second leaf15.404
SRR3591707mature leaf12.380
SRR3591708Shoot apex36.955
SRR3591709Stem18.718
SRR3591710White floral bud15.922
SRR3591711White flower16.803
SRR3591712Green floral bud23.090
SRR3591713Yellow flower10.521
SRP173429 SRR8316895Juvenile bud stage 21.513
SRR8316896Juvenile bud stage 22.348
SRR8316897Juvenile bud stage 14.614
SRR8316894Third green stage 10.102
SRR8316900Third green stage 12.466
SRR8316901Third green stage 15.229
SRR8316898Complete white stage 0.673
SRR8316899Complete white stage 17.377
SRR8316903Complete white stage 5.668
SRR8316902Silver flowering stage1.127
SRR8316904Silver flowering stage2.992
SRR8316905Silver flowering stage1.199
SRR8316906Gold flowering stage 3.504
SRR8316907Gold flowering stage 4.345
SRR8316908Gold flowering stage 6.089
SRP132670SRR6706286Control0.548
SRR6706287Light intensity 50%1.637
SRR6706288Light intensity 20%1.533
CNP0000432CNS0095592Slightly white alabastrum(diploid) 142.347
CNS0095593Slightly white alabastrum(diploid) 229.384
CNS0095594Slightly white alabastrum(diploid) 327.624
CNS0095595Whole white alabastrum(diploid) 229.169
CNS0095596Whole white alabastrum(diploid) 336.663
CNS0095597Whole white alabastrum(diploid) 443.520
CNS0095598Silvery flower (diploied) 118.866
CNS0095599Silvery flower (diploied) 216.203
CNS0095600Silvery flower (diploied) 38.208
CNS0095601Golden flower (diploid) 129.735
CNS0095602Golden flower (diploid) 215.436
CNS0095603Golden flower (diploid) 315.230
CNS0095604Slightly white alabastrum(tetraploid) 129.161
CNS0095605Slightly white alabastrum(tetraploid) 224.718
CNS0095606Slightly white alabastrum(tetraploid) 315.669
CNS0095607Whole white alabastrum(tetraploid) 124.735
CNS0095608Whole white alabastrum(tetraploid) 223.386
CNS0095609Whole white alabastrum(tetraploid) 318.734
CNS0095610Silvery flower (tetraploid) 14.163
CNS0095611Silvery flower (tetraploid) 26.258
CNS0095612Silvery flower (tetraploid) 32.879
CNS0095613Golden flower (tetraploid) 11.458
CNS0095614Golden flower (tetraploid) 22.997
CNS0095615Golden flower (tetraploid) 31.318
CRA001975CRR073297Stem 18.262
CRR073298Stem 28.222
CRR073299Stem 32.884
CRR073300Leaf 110.804
CRR073301Leaf 24.607
CRR073302Leaf 33.078
CRR073303Juvenile bud 13.849
CRR073304Juvenile bud 23.156
CRR073305Juvenile bud 31.944
CRR073306Third green 10.033
CRR073307Third green 20.298
CRR073308Third green 30.196
CRR073309Second white 10.000
CRR073310Second white 20.833
CRR073311Second white 30.031
CRR073312Silver flowering 10.479
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.465
CRR073315Gold flowering 11.153
CRR073316Gold flowering 23.594
CRR073317Gold flowering 30.654
CRR073318Tawny withering 14.098
CRR073319Tawny withering 211.482
CRR073320Tawny withering 37.942