Detail information of GWHGAAZE008366


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010651359.12.106E-130PREDICTED: uncharacterized protein LOC100257055 [Vitis vinifera]
trEMBLtr|D7SLH3|D7SLH3_VITVI4E-130Putative uncharacterized protein {ECO:0000313|EMBL:CBI16501.3}
TAIR10AT1G55280.13E-65Lipase/lipooxygenase, PLAT/LH2 family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene7185646871857659-
GWHAAZE00000002mRNA7185646871857659-
GWHAAZE00000002exon7185646871857165-
GWHAAZE00000002exon7185735671857659-
GWHAAZE00000002CDS7185735671857659-
GWHAAZE00000002CDS7185646871857165-
Transcript Sequence

Network for GWHGAAZE008366

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0042


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.305
SRR3591706second leaf5.241
SRR3591707mature leaf27.796
SRR3591708Shoot apex4.638
SRR3591709Stem8.121
SRR3591710White floral bud11.858
SRR3591711White flower16.963
SRR3591712Green floral bud7.730
SRR3591713Yellow flower23.135
SRP173429 SRR8316895Juvenile bud stage 3.427
SRR8316896Juvenile bud stage 4.143
SRR8316897Juvenile bud stage 3.029
SRR8316894Third green stage 2.315
SRR8316900Third green stage 7.798
SRR8316901Third green stage 9.700
SRR8316898Complete white stage 8.672
SRR8316899Complete white stage 14.172
SRR8316903Complete white stage 9.807
SRR8316902Silver flowering stage9.767
SRR8316904Silver flowering stage13.920
SRR8316905Silver flowering stage6.529
SRR8316906Gold flowering stage 27.156
SRR8316907Gold flowering stage 19.538
SRR8316908Gold flowering stage 23.908
SRP132670SRR6706286Control10.713
SRR6706287Light intensity 50%9.913
SRR6706288Light intensity 20%9.346
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.500
CNS0095593Slightly white alabastrum(diploid) 24.220
CNS0095594Slightly white alabastrum(diploid) 35.904
CNS0095595Whole white alabastrum(diploid) 24.759
CNS0095596Whole white alabastrum(diploid) 36.039
CNS0095597Whole white alabastrum(diploid) 46.243
CNS0095598Silvery flower (diploied) 16.603
CNS0095599Silvery flower (diploied) 28.414
CNS0095600Silvery flower (diploied) 332.064
CNS0095601Golden flower (diploid) 110.356
CNS0095602Golden flower (diploid) 224.007
CNS0095603Golden flower (diploid) 322.617
CNS0095604Slightly white alabastrum(tetraploid) 17.162
CNS0095605Slightly white alabastrum(tetraploid) 25.933
CNS0095606Slightly white alabastrum(tetraploid) 38.655
CNS0095607Whole white alabastrum(tetraploid) 15.505
CNS0095608Whole white alabastrum(tetraploid) 26.884
CNS0095609Whole white alabastrum(tetraploid) 311.462
CNS0095610Silvery flower (tetraploid) 137.237
CNS0095611Silvery flower (tetraploid) 241.515
CNS0095612Silvery flower (tetraploid) 325.793
CNS0095613Golden flower (tetraploid) 126.923
CNS0095614Golden flower (tetraploid) 235.904
CNS0095615Golden flower (tetraploid) 329.957
CRA001975CRR073297Stem 13.950
CRR073298Stem 25.801
CRR073299Stem 36.113
CRR073300Leaf 17.443
CRR073301Leaf 26.081
CRR073302Leaf 33.936
CRR073303Juvenile bud 18.070
CRR073304Juvenile bud 27.551
CRR073305Juvenile bud 34.982
CRR073306Third green 16.431
CRR073307Third green 24.499
CRR073308Third green 35.455
CRR073309Second white 110.275
CRR073310Second white 214.277
CRR073311Second white 38.374
CRR073312Silver flowering 18.847
CRR073313Silver flowering 28.508
CRR073314Silver flowering 39.326
CRR073315Gold flowering 148.025
CRR073316Gold flowering 257.376
CRR073317Gold flowering 322.539
CRR073318Tawny withering 14.412
CRR073319Tawny withering 24.663
CRR073320Tawny withering 33.678