Detail information of GWHGAAZE008374


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011089731.17.66346E-81PREDICTED: constitutive photomorphogenesis protein 10 [Sesamum indicum]
Swissprottr|Q9LJD7|COP10_ARATH2E-72Constitutive photomorphogenesis protein 10
trEMBLtr|B9GL37|B9GL37_POPTR2E-80Uncharacterized protein {ECO:0000313|EMBL:EEE84263.2}
TAIR10AT3G13550.19E-58Ubiquitin-conjugating enzyme family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene7252871372536284-
GWHAAZE00000002mRNA7252871372536284-
GWHAAZE00000002exon7253620372536284-
GWHAAZE00000002exon7253116372531236-
GWHAAZE00000002exon7252977172529918-
GWHAAZE00000002exon7252871372528810-
GWHAAZE00000002CDS7253620372536284-
GWHAAZE00000002CDS7253116372531236-
GWHAAZE00000002CDS7252977172529918-
GWHAAZE00000002CDS7252871372528810-
Transcript Sequence

Network for GWHGAAZE008374

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.27UQ_con21266.40E-39
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K20217UBE2E Ubiquitin mediated proteolysis map04120

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.015
SRR3591706second leaf22.854
SRR3591707mature leaf23.643
SRR3591708Shoot apex27.908
SRR3591709Stem12.417
SRR3591710White floral bud10.851
SRR3591711White flower14.138
SRR3591712Green floral bud14.289
SRR3591713Yellow flower6.385
SRP173429 SRR8316895Juvenile bud stage 8.561
SRR8316896Juvenile bud stage 12.713
SRR8316897Juvenile bud stage 10.023
SRR8316894Third green stage 4.573
SRR8316900Third green stage 11.783
SRR8316901Third green stage 12.312
SRR8316898Complete white stage 2.459
SRR8316899Complete white stage 15.157
SRR8316903Complete white stage 6.114
SRR8316902Silver flowering stage6.663
SRR8316904Silver flowering stage5.391
SRR8316905Silver flowering stage1.764
SRR8316906Gold flowering stage 5.787
SRR8316907Gold flowering stage 5.619
SRR8316908Gold flowering stage 8.212
SRP132670SRR6706286Control16.618
SRR6706287Light intensity 50%13.675
SRR6706288Light intensity 20%13.082
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.351
CNS0095593Slightly white alabastrum(diploid) 29.806
CNS0095594Slightly white alabastrum(diploid) 313.578
CNS0095595Whole white alabastrum(diploid) 210.810
CNS0095596Whole white alabastrum(diploid) 37.067
CNS0095597Whole white alabastrum(diploid) 47.653
CNS0095598Silvery flower (diploied) 122.159
CNS0095599Silvery flower (diploied) 29.744
CNS0095600Silvery flower (diploied) 38.199
CNS0095601Golden flower (diploid) 119.447
CNS0095602Golden flower (diploid) 213.543
CNS0095603Golden flower (diploid) 311.270
CNS0095604Slightly white alabastrum(tetraploid) 124.333
CNS0095605Slightly white alabastrum(tetraploid) 222.264
CNS0095606Slightly white alabastrum(tetraploid) 312.511
CNS0095607Whole white alabastrum(tetraploid) 118.241
CNS0095608Whole white alabastrum(tetraploid) 216.404
CNS0095609Whole white alabastrum(tetraploid) 318.039
CNS0095610Silvery flower (tetraploid) 112.744
CNS0095611Silvery flower (tetraploid) 213.952
CNS0095612Silvery flower (tetraploid) 316.039
CNS0095613Golden flower (tetraploid) 18.991
CNS0095614Golden flower (tetraploid) 210.888
CNS0095615Golden flower (tetraploid) 312.180
CRA001975CRR073297Stem 117.235
CRR073298Stem 216.536
CRR073299Stem 316.691
CRR073300Leaf 111.450
CRR073301Leaf 214.329
CRR073302Leaf 39.172
CRR073303Juvenile bud 18.317
CRR073304Juvenile bud 28.621
CRR073305Juvenile bud 38.183
CRR073306Third green 10.585
CRR073307Third green 21.126
CRR073308Third green 31.979
CRR073309Second white 10.524
CRR073310Second white 20.832
CRR073311Second white 31.066
CRR073312Silver flowering 10.000
CRR073313Silver flowering 21.027
CRR073314Silver flowering 30.517
CRR073315Gold flowering 154.849
CRR073316Gold flowering 263.047
CRR073317Gold flowering 346.659
CRR073318Tawny withering 124.337
CRR073319Tawny withering 225.178
CRR073320Tawny withering 315.222