Detail information of GWHGAAZE008377


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007215618.10hypothetical protein PRUPE_ppa007912mg [Prunus persica]
Swissprottr|Q9LHA4|VA0D2_ARATH0V-type proton ATPase subunit d2
trEMBLtr|M5WSM5|M5WSM5_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ16817.1}
TAIR10AT3G28715.10ATPase, V0/A0 complex, subunit C/D

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene7262583472632381-
GWHAAZE00000002mRNA7262583472632381-
GWHAAZE00000002exon7262583472625965-
GWHAAZE00000002exon7262648772626621-
GWHAAZE00000002exon7262692672626974-
GWHAAZE00000002exon7262707172627130-
GWHAAZE00000002exon7262724572627330-
GWHAAZE00000002exon7262742972627509-
GWHAAZE00000002exon7262785872627960-
GWHAAZE00000002exon7262804572628152-
GWHAAZE00000002exon7262917772629297-
GWHAAZE00000002exon7263220172632381-
GWHAAZE00000002CDS7263220172632381-
GWHAAZE00000002CDS7262917772629297-
GWHAAZE00000002CDS7262804572628152-
GWHAAZE00000002CDS7262785872627960-
GWHAAZE00000002CDS7262742972627509-
GWHAAZE00000002CDS7262724572627330-
GWHAAZE00000002CDS7262707172627130-
GWHAAZE00000002CDS7262692672626974-
GWHAAZE00000002CDS7262648772626621-
GWHAAZE00000002CDS7262583472625965-
Transcript Sequence

Network for GWHGAAZE008377

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01992.17vATP-synt_AC39163442.50E-113
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02146ATPeV0D, ATP6D Metabolic pathways map01100
Oxidative phosphorylationmap00190
Phagosomemap04145
Lysosomemap04142
Collecting duct acid secretionmap04966
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:1902600biological_processproton transmembrane transport
GO:0033179cellular_componentproton-transporting V-type ATPase, V0 domain
GO:0015078molecular_functionproton transmembrane transporter activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf229.353
SRR3591706second leaf116.310
SRR3591707mature leaf77.413
SRR3591708Shoot apex147.790
SRR3591709Stem154.697
SRR3591710White floral bud155.186
SRR3591711White flower142.215
SRR3591712Green floral bud184.639
SRR3591713Yellow flower146.310
SRP173429 SRR8316895Juvenile bud stage 112.069
SRR8316896Juvenile bud stage 155.331
SRR8316897Juvenile bud stage 71.762
SRR8316894Third green stage 71.692
SRR8316900Third green stage 227.594
SRR8316901Third green stage 203.454
SRR8316898Complete white stage 104.833
SRR8316899Complete white stage 239.227
SRR8316903Complete white stage 132.422
SRR8316902Silver flowering stage88.369
SRR8316904Silver flowering stage115.579
SRR8316905Silver flowering stage53.625
SRR8316906Gold flowering stage 165.907
SRR8316907Gold flowering stage 157.496
SRR8316908Gold flowering stage 181.111
SRP132670SRR6706286Control162.618
SRR6706287Light intensity 50%186.369
SRR6706288Light intensity 20%207.345
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1154.009
CNS0095593Slightly white alabastrum(diploid) 2172.810
CNS0095594Slightly white alabastrum(diploid) 3138.397
CNS0095595Whole white alabastrum(diploid) 2160.995
CNS0095596Whole white alabastrum(diploid) 3163.043
CNS0095597Whole white alabastrum(diploid) 4155.897
CNS0095598Silvery flower (diploied) 1102.003
CNS0095599Silvery flower (diploied) 2103.977
CNS0095600Silvery flower (diploied) 3170.294
CNS0095601Golden flower (diploid) 190.284
CNS0095602Golden flower (diploid) 2148.352
CNS0095603Golden flower (diploid) 3137.695
CNS0095604Slightly white alabastrum(tetraploid) 1143.108
CNS0095605Slightly white alabastrum(tetraploid) 2128.142
CNS0095606Slightly white alabastrum(tetraploid) 3182.489
CNS0095607Whole white alabastrum(tetraploid) 1106.571
CNS0095608Whole white alabastrum(tetraploid) 2127.492
CNS0095609Whole white alabastrum(tetraploid) 3181.131
CNS0095610Silvery flower (tetraploid) 1159.682
CNS0095611Silvery flower (tetraploid) 2150.753
CNS0095612Silvery flower (tetraploid) 3170.462
CNS0095613Golden flower (tetraploid) 1120.925
CNS0095614Golden flower (tetraploid) 2129.992
CNS0095615Golden flower (tetraploid) 3136.623
CRA001975CRR073297Stem 1154.658
CRR073298Stem 2148.484
CRR073299Stem 3173.470
CRR073300Leaf 1199.496
CRR073301Leaf 2174.168
CRR073302Leaf 3215.381
CRR073303Juvenile bud 1237.652
CRR073304Juvenile bud 2243.527
CRR073305Juvenile bud 3254.150
CRR073306Third green 1169.674
CRR073307Third green 2181.303
CRR073308Third green 3170.207
CRR073309Second white 1211.215
CRR073310Second white 2147.485
CRR073311Second white 3130.644
CRR073312Silver flowering 1145.926
CRR073313Silver flowering 2157.127
CRR073314Silver flowering 3113.537
CRR073315Gold flowering 1101.098
CRR073316Gold flowering 2119.314
CRR073317Gold flowering 3107.551
CRR073318Tawny withering 1137.032
CRR073319Tawny withering 2122.365
CRR073320Tawny withering 3161.082