Detail information of GWHGAAZE008389


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAIU98521.11.98146E-40MYB transcription factor [Paeonia suffruticosa]
Swissprottr|Q38850|MYB5_ARATH5E-28Transcription repressor MYB5
trEMBLtr|A0A061EW76|A0A061EW76_THECC3E-40Myb domain protein 5 isoform 1 {ECO:0000313|EMBL:EOY08908.1}
TAIR10AT3G13540.12E-24myb domain protein 5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene7299496972996233-
GWHAAZE00000002mRNA7299496972996233-
GWHAAZE00000002exon7299496972995551-
GWHAAZE00000002exon7299609172996233-
GWHAAZE00000002CDS7299609172996233-
GWHAAZE00000002CDS7299496972995551-
Transcript Sequence

Network for GWHGAAZE008389

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.32Myb_DNA-binding49728.10E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.130
SRR3591706second leaf0.081
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.741
SRR3591709Stem1.983
SRR3591710White floral bud3.693
SRR3591711White flower1.396
SRR3591712Green floral bud4.600
SRR3591713Yellow flower0.003
SRP173429 SRR8316895Juvenile bud stage 4.899
SRR8316896Juvenile bud stage 5.425
SRR8316897Juvenile bud stage 2.521
SRR8316894Third green stage 2.037
SRR8316900Third green stage 4.188
SRR8316901Third green stage 3.659
SRR8316898Complete white stage 0.503
SRR8316899Complete white stage 3.479
SRR8316903Complete white stage 2.182
SRR8316902Silver flowering stage0.353
SRR8316904Silver flowering stage0.299
SRR8316905Silver flowering stage0.051
SRR8316906Gold flowering stage 0.116
SRR8316907Gold flowering stage 0.979
SRR8316908Gold flowering stage 0.920
SRP132670SRR6706286Control3.369
SRR6706287Light intensity 50%3.787
SRR6706288Light intensity 20%3.438
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.625
CNS0095593Slightly white alabastrum(diploid) 27.721
CNS0095594Slightly white alabastrum(diploid) 316.024
CNS0095595Whole white alabastrum(diploid) 29.056
CNS0095596Whole white alabastrum(diploid) 38.093
CNS0095597Whole white alabastrum(diploid) 49.159
CNS0095598Silvery flower (diploied) 15.203
CNS0095599Silvery flower (diploied) 27.254
CNS0095600Silvery flower (diploied) 32.041
CNS0095601Golden flower (diploid) 15.418
CNS0095602Golden flower (diploid) 22.496
CNS0095603Golden flower (diploid) 32.533
CNS0095604Slightly white alabastrum(tetraploid) 12.925
CNS0095605Slightly white alabastrum(tetraploid) 25.557
CNS0095606Slightly white alabastrum(tetraploid) 31.581
CNS0095607Whole white alabastrum(tetraploid) 14.718
CNS0095608Whole white alabastrum(tetraploid) 24.641
CNS0095609Whole white alabastrum(tetraploid) 32.432
CNS0095610Silvery flower (tetraploid) 10.335
CNS0095611Silvery flower (tetraploid) 20.490
CNS0095612Silvery flower (tetraploid) 30.913
CNS0095613Golden flower (tetraploid) 10.190
CNS0095614Golden flower (tetraploid) 20.101
CNS0095615Golden flower (tetraploid) 30.428
CRA001975CRR073297Stem 17.440
CRR073298Stem 26.435
CRR073299Stem 32.720
CRR073300Leaf 12.565
CRR073301Leaf 23.121
CRR073302Leaf 32.396
CRR073303Juvenile bud 10.444
CRR073304Juvenile bud 20.961
CRR073305Juvenile bud 31.022
CRR073306Third green 10.432
CRR073307Third green 20.804
CRR073308Third green 30.371
CRR073309Second white 10.278
CRR073310Second white 20.000
CRR073311Second white 30.052
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.096
CRR073316Gold flowering 20.070
CRR073317Gold flowering 30.055
CRR073318Tawny withering 13.719
CRR073319Tawny withering 21.590
CRR073320Tawny withering 34.846