Detail information of GWHGAAZE008516


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006356872.10PREDICTED: pyruvate kinase, cytosolic isozyme-like [Solanum tuberosum]
Swissprottr|Q42954|KPYC_TOBAC0Pyruvate kinase, cytosolic isozyme
trEMBLtr|M1AQZ1|M1AQZ1_SOLTU0Pyruvate kinase {ECO:0000256|RuleBase:RU000504}
TAIR10AT5G56350.10Pyruvate kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene7922837879233961-
GWHAAZE00000002mRNA7922837879233961-
GWHAAZE00000002exon7922837879229190-
GWHAAZE00000002exon7923014179230602-
GWHAAZE00000002exon7923374379233961-
GWHAAZE00000002CDS7923374379233961-
GWHAAZE00000002CDS7923014179230602-
GWHAAZE00000002CDS7922837879229190-
Transcript Sequence

Network for GWHGAAZE008516

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0160


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00224.22PK83514.90E-157
PF02887.17PK_C3674944.00E-22
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00873PK, pyk Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pyruvate metabolismmap00620
Purine metabolismmap00230
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0006096biological_processglycolytic process
GO:0000287molecular_functionmagnesium ion binding
GO:0004743molecular_functionpyruvate kinase activity
GO:0030955molecular_functionpotassium ion binding
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf49.417
SRR3591706second leaf15.333
SRR3591707mature leaf14.249
SRR3591708Shoot apex18.284
SRR3591709Stem55.329
SRR3591710White floral bud72.545
SRR3591711White flower113.867
SRR3591712Green floral bud82.281
SRR3591713Yellow flower83.849
SRP173429 SRR8316895Juvenile bud stage 36.949
SRR8316896Juvenile bud stage 59.369
SRR8316897Juvenile bud stage 23.418
SRR8316894Third green stage 25.663
SRR8316900Third green stage 135.808
SRR8316901Third green stage 116.417
SRR8316898Complete white stage 71.829
SRR8316899Complete white stage 194.384
SRR8316903Complete white stage 79.964
SRR8316902Silver flowering stage66.361
SRR8316904Silver flowering stage74.978
SRR8316905Silver flowering stage39.292
SRR8316906Gold flowering stage 170.338
SRR8316907Gold flowering stage 156.258
SRR8316908Gold flowering stage 175.678
SRP132670SRR6706286Control123.170
SRR6706287Light intensity 50%131.802
SRR6706288Light intensity 20%143.770
CNP0000432CNS0095592Slightly white alabastrum(diploid) 152.723
CNS0095593Slightly white alabastrum(diploid) 285.166
CNS0095594Slightly white alabastrum(diploid) 356.620
CNS0095595Whole white alabastrum(diploid) 282.285
CNS0095596Whole white alabastrum(diploid) 385.495
CNS0095597Whole white alabastrum(diploid) 481.749
CNS0095598Silvery flower (diploied) 147.244
CNS0095599Silvery flower (diploied) 247.594
CNS0095600Silvery flower (diploied) 395.979
CNS0095601Golden flower (diploid) 139.154
CNS0095602Golden flower (diploid) 269.951
CNS0095603Golden flower (diploid) 367.350
CNS0095604Slightly white alabastrum(tetraploid) 160.593
CNS0095605Slightly white alabastrum(tetraploid) 251.861
CNS0095606Slightly white alabastrum(tetraploid) 374.912
CNS0095607Whole white alabastrum(tetraploid) 162.505
CNS0095608Whole white alabastrum(tetraploid) 263.886
CNS0095609Whole white alabastrum(tetraploid) 383.888
CNS0095610Silvery flower (tetraploid) 1114.632
CNS0095611Silvery flower (tetraploid) 291.426
CNS0095612Silvery flower (tetraploid) 3119.417
CNS0095613Golden flower (tetraploid) 1100.073
CNS0095614Golden flower (tetraploid) 294.779
CNS0095615Golden flower (tetraploid) 396.121
CRA001975CRR073297Stem 158.999
CRR073298Stem 251.032
CRR073299Stem 362.238
CRR073300Leaf 1118.867
CRR073301Leaf 2119.331
CRR073302Leaf 3120.756
CRR073303Juvenile bud 1206.675
CRR073304Juvenile bud 2139.589
CRR073305Juvenile bud 3217.225
CRR073306Third green 1181.631
CRR073307Third green 2166.750
CRR073308Third green 3148.762
CRR073309Second white 1292.264
CRR073310Second white 2233.404
CRR073311Second white 3199.918
CRR073312Silver flowering 1233.077
CRR073313Silver flowering 2280.680
CRR073314Silver flowering 3208.752
CRR073315Gold flowering 132.484
CRR073316Gold flowering 232.144
CRR073317Gold flowering 335.594
CRR073318Tawny withering 184.543
CRR073319Tawny withering 284.322
CRR073320Tawny withering 391.498