Detail information of GWHGAAZE008537


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008227374.10PREDICTED: translation initiation factor eIF-2B subunit gamma isoform X3 [Prunus mume]
trEMBLtr|M5WMT6|M5WMT6_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ15107.1}
TAIR10AT5G19485.11E-151transferases;nucleotidyltransferases

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene8107149081084974-
GWHAAZE00000002mRNA8107149081084974-
GWHAAZE00000002exon8108490981084974-
GWHAAZE00000002exon8108470381084798-
GWHAAZE00000002exon8108411281084189-
GWHAAZE00000002exon8107635981076439-
GWHAAZE00000002exon8107604181076260-
GWHAAZE00000002exon8107589581075953-
GWHAAZE00000002exon8107546381075512-
GWHAAZE00000002exon8107529281075379-
GWHAAZE00000002exon8107463381074899-
GWHAAZE00000002exon8107374481073836-
GWHAAZE00000002exon8107216081072276-
GWHAAZE00000002exon8107149081071564-
GWHAAZE00000002CDS8108490981084974-
GWHAAZE00000002CDS8108470381084798-
GWHAAZE00000002CDS8108411281084189-
GWHAAZE00000002CDS8107635981076439-
GWHAAZE00000002CDS8107604181076260-
GWHAAZE00000002CDS8107589581075953-
GWHAAZE00000002CDS8107546381075512-
GWHAAZE00000002CDS8107529281075379-
GWHAAZE00000002CDS8107463381074899-
GWHAAZE00000002CDS8107374481073836-
GWHAAZE00000002CDS8107216081072276-
GWHAAZE00000002CDS8107149081071564-
Transcript Sequence

Network for GWHGAAZE008537

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00483.24NTP_transferase61431.90E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03241EIF2B3 RNA transport map03013

Gene Ontology

GO term OntologyName
GO:0009058biological_processbiosynthetic process
GO:0016779molecular_functionnucleotidyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.684
SRR3591706second leaf18.073
SRR3591707mature leaf16.293
SRR3591708Shoot apex16.028
SRR3591709Stem14.829
SRR3591710White floral bud15.006
SRR3591711White flower22.006
SRR3591712Green floral bud17.249
SRR3591713Yellow flower16.107
SRP173429 SRR8316895Juvenile bud stage 15.674
SRR8316896Juvenile bud stage 21.139
SRR8316897Juvenile bud stage 12.056
SRR8316894Third green stage 9.374
SRR8316900Third green stage 23.715
SRR8316901Third green stage 24.049
SRR8316898Complete white stage 10.609
SRR8316899Complete white stage 34.509
SRR8316903Complete white stage 15.490
SRR8316902Silver flowering stage12.382
SRR8316904Silver flowering stage14.986
SRR8316905Silver flowering stage8.623
SRR8316906Gold flowering stage 25.286
SRR8316907Gold flowering stage 28.295
SRR8316908Gold flowering stage 26.654
SRP132670SRR6706286Control32.557
SRR6706287Light intensity 50%33.481
SRR6706288Light intensity 20%35.001
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.537
CNS0095593Slightly white alabastrum(diploid) 219.387
CNS0095594Slightly white alabastrum(diploid) 317.408
CNS0095595Whole white alabastrum(diploid) 218.338
CNS0095596Whole white alabastrum(diploid) 316.210
CNS0095597Whole white alabastrum(diploid) 413.544
CNS0095598Silvery flower (diploied) 118.436
CNS0095599Silvery flower (diploied) 217.387
CNS0095600Silvery flower (diploied) 325.629
CNS0095601Golden flower (diploid) 113.780
CNS0095602Golden flower (diploid) 220.689
CNS0095603Golden flower (diploid) 318.529
CNS0095604Slightly white alabastrum(tetraploid) 118.036
CNS0095605Slightly white alabastrum(tetraploid) 219.407
CNS0095606Slightly white alabastrum(tetraploid) 328.025
CNS0095607Whole white alabastrum(tetraploid) 110.490
CNS0095608Whole white alabastrum(tetraploid) 211.544
CNS0095609Whole white alabastrum(tetraploid) 320.517
CNS0095610Silvery flower (tetraploid) 126.224
CNS0095611Silvery flower (tetraploid) 222.691
CNS0095612Silvery flower (tetraploid) 316.692
CNS0095613Golden flower (tetraploid) 113.207
CNS0095614Golden flower (tetraploid) 217.990
CNS0095615Golden flower (tetraploid) 314.044
CRA001975CRR073297Stem 120.254
CRR073298Stem 218.400
CRR073299Stem 320.082
CRR073300Leaf 119.525
CRR073301Leaf 219.363
CRR073302Leaf 322.334
CRR073303Juvenile bud 128.988
CRR073304Juvenile bud 217.704
CRR073305Juvenile bud 328.582
CRR073306Third green 17.873
CRR073307Third green 210.107
CRR073308Third green 38.703
CRR073309Second white 114.517
CRR073310Second white 215.963
CRR073311Second white 313.070
CRR073312Silver flowering 112.984
CRR073313Silver flowering 210.788
CRR073314Silver flowering 39.248
CRR073315Gold flowering 110.219
CRR073316Gold flowering 217.299
CRR073317Gold flowering 37.282
CRR073318Tawny withering 124.772
CRR073319Tawny withering 220.951
CRR073320Tawny withering 327.540