Detail information of GWHGAAZE008542


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP08441.10unnamed protein product [Coffea canephora]
Swissprottr|O81020|NPC2_ARATH0Non-specific phospholipase C2 (Precursor)
trEMBLtr|A0A068UIX9|A0A068UIX9_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_33 {ECO:0000313|EMBL:CDP08441.1}
TAIR10AT2G26870.10non-specific phospholipase C2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene8149229181499045-
GWHAAZE00000002mRNA8149229181499045-
GWHAAZE00000002exon8149846581499045-
GWHAAZE00000002exon8149780081498061-
GWHAAZE00000002exon8149748581497725-
GWHAAZE00000002exon8149499481495173-
GWHAAZE00000002exon8149229181492675-
GWHAAZE00000002CDS8149846581499045-
GWHAAZE00000002CDS8149780081498061-
GWHAAZE00000002CDS8149748581497725-
GWHAAZE00000002CDS8149499481495173-
GWHAAZE00000002CDS8149236581492675-
GWHAAZE00000002three_prime_UTR8149229181492364-
Transcript Sequence

Network for GWHGAAZE008542

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04185.15Phosphoesterase313914.50E-109
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01114plc Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Inositol phosphate metabolismmap00562
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565
Quorum sensingmap02024
Thyroid hormone signaling pathwaymap04919

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity
GO:0016788molecular_functionhydrolase activity, acting on ester bonds

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.500
SRR3591706second leaf5.281
SRR3591707mature leaf2.536
SRR3591708Shoot apex10.764
SRR3591709Stem11.452
SRR3591710White floral bud4.534
SRR3591711White flower3.082
SRR3591712Green floral bud4.341
SRR3591713Yellow flower1.486
SRP173429 SRR8316895Juvenile bud stage 3.528
SRR8316896Juvenile bud stage 1.981
SRR8316897Juvenile bud stage 1.688
SRR8316894Third green stage 1.318
SRR8316900Third green stage 4.114
SRR8316901Third green stage 3.288
SRR8316898Complete white stage 1.431
SRR8316899Complete white stage 4.795
SRR8316903Complete white stage 2.485
SRR8316902Silver flowering stage0.132
SRR8316904Silver flowering stage0.241
SRR8316905Silver flowering stage0.171
SRR8316906Gold flowering stage 0.223
SRR8316907Gold flowering stage 0.428
SRR8316908Gold flowering stage 1.334
SRP132670SRR6706286Control5.912
SRR6706287Light intensity 50%6.183
SRR6706288Light intensity 20%5.686
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.918
CNS0095593Slightly white alabastrum(diploid) 25.358
CNS0095594Slightly white alabastrum(diploid) 32.206
CNS0095595Whole white alabastrum(diploid) 23.177
CNS0095596Whole white alabastrum(diploid) 32.378
CNS0095597Whole white alabastrum(diploid) 43.074
CNS0095598Silvery flower (diploied) 14.937
CNS0095599Silvery flower (diploied) 24.914
CNS0095600Silvery flower (diploied) 33.095
CNS0095601Golden flower (diploid) 17.024
CNS0095602Golden flower (diploid) 24.081
CNS0095603Golden flower (diploid) 34.745
CNS0095604Slightly white alabastrum(tetraploid) 14.886
CNS0095605Slightly white alabastrum(tetraploid) 24.414
CNS0095606Slightly white alabastrum(tetraploid) 310.565
CNS0095607Whole white alabastrum(tetraploid) 13.920
CNS0095608Whole white alabastrum(tetraploid) 21.540
CNS0095609Whole white alabastrum(tetraploid) 33.767
CNS0095610Silvery flower (tetraploid) 11.151
CNS0095611Silvery flower (tetraploid) 22.520
CNS0095612Silvery flower (tetraploid) 31.764
CNS0095613Golden flower (tetraploid) 11.316
CNS0095614Golden flower (tetraploid) 21.269
CNS0095615Golden flower (tetraploid) 30.642
CRA001975CRR073297Stem 111.501
CRR073298Stem 211.489
CRR073299Stem 311.905
CRR073300Leaf 117.526
CRR073301Leaf 212.953
CRR073302Leaf 317.947
CRR073303Juvenile bud 18.883
CRR073304Juvenile bud 28.820
CRR073305Juvenile bud 317.435
CRR073306Third green 10.954
CRR073307Third green 20.680
CRR073308Third green 30.843
CRR073309Second white 10.986
CRR073310Second white 20.415
CRR073311Second white 30.884
CRR073312Silver flowering 11.786
CRR073313Silver flowering 21.780
CRR073314Silver flowering 31.578
CRR073315Gold flowering 10.992
CRR073316Gold flowering 21.178
CRR073317Gold flowering 31.200
CRR073318Tawny withering 114.703
CRR073319Tawny withering 27.476
CRR073320Tawny withering 313.380