Gene detail

Detail information of GWHGAAZE008700

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_002273629.1	PREDICTED: abscisic-aldehyde oxidase-like [Vitis vinifera]
Swissprot	tr\|Q7G191\|ALDO4_ARATH	Benzaldehyde dehydrogenase (NAD(+))
trEMBL	tr\|F6HAB3\|F6HAB3_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB49192.1}
TAIR10	AT1G04580.1	aldehyde oxidase 4

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	88231598	88245692	+
GWHAAZE00000002	mRNA	88231598	88245692	+
GWHAAZE00000002	exon	88231598	88231757	+
GWHAAZE00000002	exon	88233486	88234393	+
GWHAAZE00000002	exon	88234467	88235134	+
GWHAAZE00000002	exon	88237586	88237838	+
GWHAAZE00000002	exon	88237934	88238143	+
GWHAAZE00000002	exon	88239413	88239631	+
GWHAAZE00000002	exon	88240814	88241779	+
GWHAAZE00000002	exon	88242932	88243027	+
GWHAAZE00000002	exon	88243749	88243847	+
GWHAAZE00000002	exon	88244705	88244894	+
GWHAAZE00000002	exon	88245457	88245692	+
GWHAAZE00000002	CDS	88231598	88231757	+
GWHAAZE00000002	CDS	88233486	88234393	+
GWHAAZE00000002	CDS	88234467	88235134	+
GWHAAZE00000002	CDS	88237586	88237838	+
GWHAAZE00000002	CDS	88237934	88238143	+
GWHAAZE00000002	CDS	88239413	88239631	+
GWHAAZE00000002	CDS	88240814	88241779	+
GWHAAZE00000002	CDS	88242932	88243027	+
GWHAAZE00000002	CDS	88243749	88243847	+
GWHAAZE00000002	CDS	88244705	88244894	+
GWHAAZE00000002	CDS	88245457	88245692	+

Transcript Sequence
>GWHTAAZE008710 ATGGATGGGAGAGAAATGTCAAATGCAGCAAAGAAATTAGACACTCTGGTCTTTGCAGTTAATGGAGAGAGATTTGAGCTCTCTGATGTTGATCCTTCCACCACTTTGCTTGAATTCTTGCGCACTCAAACTCGTTTCAAGGGTGTCAAGCTTAGCTGTGGTGGTTGTGGTGCTTGCGATGTTCTACTGTCAAAGTATGACCCCGTGCTAAAACAAGTCGAAAATGACAAAGTGAATTCATGCCTTGCTCTTCTTTGCAGCATAAATGGGTGTTCAATTACTACAACCGAAGGCCTTGGAAATAGCAAAGATGGGTTACACCCAATTCATAAAAGGATGGCTGGTTTTCATGCTTCTCAATGCGGCTTTTGCACTCCTGCAATGTGTATTTCACTCTTCTCGGCACTTGTCAATGCCAAAAATGCAAATCGACCAGAGCCCCCTCCGGGATTTTCCAAACTTACGGTTTTGGAGGCTGAACAAGCTATTGTAGGAAATCTCTGTCGATGTACTGGCTATCGACCCATTGCTGATACCTGCAAAAGTTTTGCTGCTGATGTTGATATAGAGGACTTAGGGATCAATGCTTTCTGGAAAAAGGGAGATAGTATTGAAGATAAAATTAGTAAATTACCTTTTTATGATCCCAATGACGAAATTTGTACATATCCTGACTTCTTGAAAAATGAATCTAAGCCACTGAACTTTAAAAGTCAATCTTGGTCTACTCCTCTTACTATTGAGGAGCTTCAGAGCTTGTTGGAAGTACATTTTGCAGGAAATGGTACAAAGATAAAGTTAGTTGTTGGTAACACATCGACAGGTTATTATCATGATCTGGAGCACTATGACAAGTACATTGACTTGAGGTATATCCCTGAGCTCTCATTGATTCGAAGGGATCACACGGGGATTGAAATTGGTGCAACTGTATCGATTTCGAAAGCTATTTTAGCTCTAAGGGAAGAACATGAAGGCGAGTTATGCTCTGAAGCCGAGTTGGTGTTCCAAAAAATTGCTAACCACATGGAGAGGGTTGCTTCAGAGTCCATCCGAAATTTCGCTAGTGACTCAATAGTTAGTATAATCACAGGTCAGAAGCATGAAAAGCTTACGTTTGAGGAGTTCCTGGGGAGGCCACCTTTGGACTCCAAAAGTGTGCTTTTGAGTGTCAAAATTCCATGTTGGAAGCCAAAAAGAAAGGGTTTATCTTCGGAAACAGAGACAAAGTTGCTTTTTGAAACCTATCGTGCTTCTCCTCGGCCCCTTGGAAATGCATTGCCCTTTTTAAATGCTGCTTTCTTGGCTGATATTTCATCTTCTAAAACTGGACTTTTAGTAAATAACATTCACCTGGCTTTTGGTGCTTATGGGACTAAACATGCAATAAGGGCAAGAAAAGTTGAAGAATATCTAGTTGGGAAAGTGCTAAGTTTTGGTGTTCTTTATGAAGCTGTTAAATTAGTTAAGGCTGCTGTAGTACCCGAACATGGTACTTCAGACCCTGCGTACCGGTCAAGCTTGGCTGTTGGTTATCTTTGTGAATTTCTTCTTCCCTTGATTGATCCCGATTCTGTAACTTCTGATCCTTATGAGTTTGATGATGTTGGAAACCCGGGATTGGTTTCATCTGCAAAACAGGTGATCGAACCAAGCAAAGAGTACTATCCGGTGGGTAAACCGATCATGAAAACTGGTGCTGCCCTCCAAGCTTCTGGTTTGTTCTGCCTTCTTTGCTATTTTGTGGATGATATTCCTTCGCCAGAAAATTGCCTTCACGGAGCATTTATTCATAGCACCAAGCCTTTGGCATGGGTAAAGGATGTCAAATTCGAGTCTAAGTCTCTAATAGATGGAGTAACTGATATTATTTCGTTTAAAGATATCCCAAAAGGAGGAGAGAACATAGGATCCAGGACCCCATTTGGCGATGAACCTTTATTCGCGGATGATCTTACAAGCTATGCAGGGCAGCCAGTTGCTTTTGTGGTGGCAGATACGCAAAGGCATGCAGATGTGGGGGCTGAGATGGCCATCGTCGATTATGACACTGAAGGTTTAGGACCACCTATTTTAACGGTTGAAGAGGCTTTTGAAAGATCAAGCTTTTTCGAGGTCCCTTCTGACTGGTATCCAGCACAGGTTGGTGATTTCTCGAAAGGAATGTCCGAAGCGGATCACCAAATTCTCTCTGCTGAGATTAGACTTGGGTCGCAGTACTTTTTCTATATGGAAACACAAACTGCCCTCGCCATTCCAGACGAAGACAACTGCATGGTGGTTTACAGTTCAAGTCAGTGCCCTGAATATGCCCATACTGTTATTGCAAGGTGTCTTGGTATTCCAGAACATAATGTTCGTGTTATTACGAGAAGGGTTGGAGGAGGCTTTGGTGGAAAGTCCACGAAATCTATGCCTATTGCTGCCGCATCTGCACTTGCAGCACACAAATTACGGCACCCTGTCCGTATATATGTCAATAGGAAGTCCGATATGATGATGGCAGGAGGAAGACAGCCTATGAAGATAACATACAGTGTTGGCTTCAAATCTGACGGGAAGATCACAGCCTTACACCTTGATATTTTAATCAATTCTGGGATAGCTATAGATTTAAGCCCCATAGTGCCAGGGAATTTGATAGGTTCACTTAATAAGTACGATTGGGGTGCTTTATCTTTCAATATAAAGTTATGCAAAACAAATACTAGCTCTAAAACCATTATGCGGGGTCCTGGGGAGGTAAATGCAACTTTTATCGCAGAAGCCATAATAGAACGTGTGGCATCTACACTTTCAATGGAAGTAGATTTTATAAGAACAAAAAATCTTCACACGTACGAAAGCCTCAGCTTGTTTTATGAAGGCAGTGCAGGGGAGCCTCAAGAGTATACTTTGCCTTCCATAATGGATAAGTTGGCAAGCACATCAAGCTTTGAAAAACGGATTGAAATGACAAAAGAGTATAATTTGTGTGATAAATGGCGAAAAAAGGGGATTTCTCGGGTACCCATTATTCATCAATGTACACTGCTACCAATTCCAGCGAAAGTAAGCATTCTTTGGGATGGATCTGTTGCAGTAGAAGTTGGTGGGATTGAGATAGGCCAGGGGCTGTGGACTAAAGTAAAACAGATGACTGCATATGCTCTTAGTTTGATTCAATGTGATGGAACTGAAGACCTCTTGGATAAAGTACGGGTCATACAAGCAGACACTTTGAGCTTAGTACAAGGTGGGTTTACTGGTGAGAGCTCTACATCTGAATCAAGCTGTGGGGCAGTTAGAGTTTGCTGCGACATTTTGGTTGGAAGATTAGCCCCTCTAAAGGAAGAATTGCAACAGCAAATGGGTTCTGTTACATGGGATGACATTATTCTTCAGGCGCATTCTGAAAATGTAAATTTATCAGCAAGTACTTACCTTGTACCTGACTCGAATTCATTGCATTACCTGAATTATGGTGCTGCTGTGAGTGAGGTCGAAGTAAATATTCTTACTGGAGAAACCAGAATTTTGCGATCAGATATTATTTACGACTGCGGACAAAGCCTCAACCCTGCTGTGGATTTAGGACAGATTGAAGGTGCTTTTGTACAAGGCATTGGATTCTTTATGTCCGAAGAGTACCTTTCGAATTCAGATGGAATGGTGGTTACAGTGGGCACATGGACATACGAAATACCAACAATAGACACCATTCCCACATGGTTCAATGTGGAGGTACTCAACAGTGGGCATCACAAAAATCGCGTTCTCTCCTCTAAAGCTTCGGGTGAGCCACCGTTACTTCTGGCAGTCTCAGTTCATTGTGCAACAAGAGCAGCCATTAAAGAAGCAAGAAAGCAGCTTTGTTCTTGGGGCGGATTAGAGGGTTCTGATTCAGAATCGACATTATTCGACTTAGAGGTTCCTGCTACTATGCCTGTTGTCAAGCAACTCTGTGGACTCGACAGTGTGGAGAAGTACTTGCAGTTTTGCGCTTCTCTGTCAGATTCAACATAG

Network for GWHGAAZE008700

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00111.28	Fer2	19	84	4.80E-05
PF01799.21	Fer2_2	95	180	1.20E-20
PF00941.22	FAD_binding_5	240	356	2.60E-17
PF03450.18	CO_deh_flav_C	415	518	1.90E-19
PF01315.23	Ald_Xan_dh_C	581	684	5.70E-25
PF02738.19	Ald_Xan_dh_C2	711	1235	1.90E-158

Protein Sequence

>GWHPAAZE008705
MDGREMSNAAKKLDTLVFAVNGERFELSDVDPSTTLLEFLRTQTRFKGVKLSCGGCGACDVLLSKYDPVLKQVENDKVNSCLALLCSINGCSITTTEGLGNSKDGLHPIHKRMAGFHASQCGFCTPAMCISLFSALVNAKNANRPEPPPGFSKLTVLEAEQAIVGNLCRCTGYRPIADTCKSFAADVDIEDLGINAFWKKGDSIEDKISKLPFYDPNDEICTYPDFLKNESKPLNFKSQSWSTPLTIEELQSLLEVHFAGNGTKIKLVVGNTSTGYYHDLEHYDKYIDLRYIPELSLIRRDHTGIEIGATVSISKAILALREEHEGELCSEAELVFQKIANHMERVASESIRNFASDSIVSIITGQKHEKLTFEEFLGRPPLDSKSVLLSVKIPCWKPKRKGLSSETETKLLFETYRASPRPLGNALPFLNAAFLADISSSKTGLLVNNIHLAFGAYGTKHAIRARKVEEYLVGKVLSFGVLYEAVKLVKAAVVPEHGTSDPAYRSSLAVGYLCEFLLPLIDPDSVTSDPYEFDDVGNPGLVSSAKQVIEPSKEYYPVGKPIMKTGAALQASGLFCLLCYFVDDIPSPENCLHGAFIHSTKPLAWVKDVKFESKSLIDGVTDIISFKDIPKGGENIGSRTPFGDEPLFADDLTSYAGQPVAFVVADTQRHADVGAEMAIVDYDTEGLGPPILTVEEAFERSSFFEVPSDWYPAQVGDFSKGMSEADHQILSAEIRLGSQYFFYMETQTALAIPDEDNCMVVYSSSQCPEYAHTVIARCLGIPEHNVRVITRRVGGGFGGKSTKSMPIAAASALAAHKLRHPVRIYVNRKSDMMMAGGRQPMKITYSVGFKSDGKITALHLDILINSGIAIDLSPIVPGNLIGSLNKYDWGALSFNIKLCKTNTSSKTIMRGPGEVNATFIAEAIIERVASTLSMEVDFIRTKNLHTYESLSLFYEGSAGEPQEYTLPSIMDKLASTSSFEKRIEMTKEYNLCDKWRKKGISRVPIIHQCTLLPIPAKVSILWDGSVAVEVGGIEIGQGLWTKVKQMTAYALSLIQCDGTEDLLDKVRVIQADTLSLVQGGFTGESSTSESSCGAVRVCCDILVGRLAPLKEELQQQMGSVTWDDIILQAHSENVNLSASTYLVPDSNSLHYLNYGAAVSEVEVNILTGETRILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMSEEYLSNSDGMVVTVGTWTYEIPTIDTIPTWFNVEVLNSGHHKNRVLSSKASGEPPLLLAVSVHCATRAAIKEARKQLCSWGGLEGSDSESTLFDLEVPATMPVVKQLCGLDSVEKYLQFCASLSDST

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09842	AAO3	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Carotenoid biosynthesis	map00906

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0071949	molecular_function	FAD binding
GO:0005506	molecular_function	iron ion binding
GO:0016491	molecular_function	oxidoreductase activity
GO:0009055	molecular_function	electron transfer activity
GO:0051536	molecular_function	iron-sulfur cluster binding
GO:0050660	molecular_function	flavin adenine dinucleotide binding
GO:0046872	molecular_function	metal ion binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.436
	SRR3591706	second leaf	1.876
	SRR3591707	mature leaf	0.528
	SRR3591708	Shoot apex	6.368
	SRR3591709	Stem	0.231
	SRR3591710	White floral bud	24.381
	SRR3591711	White flower	33.546
	SRR3591712	Green floral bud	7.459
	SRR3591713	Yellow flower	48.806
SRP173429	SRR8316895	Juvenile bud stage	3.066
	SRR8316896	Juvenile bud stage	5.564
	SRR8316897	Juvenile bud stage	0.544
	SRR8316894	Third green stage	1.633
	SRR8316900	Third green stage	4.693
	SRR8316901	Third green stage	5.045
	SRR8316898	Complete white stage	4.574
	SRR8316899	Complete white stage	5.228
	SRR8316903	Complete white stage	8.257
	SRR8316902	Silver flowering stage	3.717
	SRR8316904	Silver flowering stage	6.948
	SRR8316905	Silver flowering stage	2.585
	SRR8316906	Gold flowering stage	8.128
	SRR8316907	Gold flowering stage	10.721
	SRR8316908	Gold flowering stage	2.311
SRP132670	SRR6706286	Control	4.454
	SRR6706287	Light intensity 50%	5.148
	SRR6706288	Light intensity 20%	5.081
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.748
	CNS0095593	Slightly white alabastrum(diploid) 2	2.221
	CNS0095594	Slightly white alabastrum(diploid) 3	2.448
	CNS0095595	Whole white alabastrum(diploid) 2	2.226
	CNS0095596	Whole white alabastrum(diploid) 3	1.865
	CNS0095597	Whole white alabastrum(diploid) 4	1.826
	CNS0095598	Silvery flower (diploied) 1	4.247
	CNS0095599	Silvery flower (diploied) 2	3.512
	CNS0095600	Silvery flower (diploied) 3	17.998
	CNS0095601	Golden flower (diploid) 1	3.084
	CNS0095602	Golden flower (diploid) 2	17.588
	CNS0095603	Golden flower (diploid) 3	17.146
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.667
	CNS0095605	Slightly white alabastrum(tetraploid) 2	4.081
	CNS0095606	Slightly white alabastrum(tetraploid) 3	10.245
	CNS0095607	Whole white alabastrum(tetraploid) 1	2.352
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.970
	CNS0095609	Whole white alabastrum(tetraploid) 3	9.818
	CNS0095610	Silvery flower (tetraploid) 1	45.997
	CNS0095611	Silvery flower (tetraploid) 2	27.295
	CNS0095612	Silvery flower (tetraploid) 3	26.874
	CNS0095613	Golden flower (tetraploid) 1	11.566
	CNS0095614	Golden flower (tetraploid) 2	26.319
	CNS0095615	Golden flower (tetraploid) 3	20.741
CRA001975	CRR073297	Stem 1	4.363
	CRR073298	Stem 2	3.737
	CRR073299	Stem 3	2.729
	CRR073300	Leaf 1	3.176
	CRR073301	Leaf 2	2.190
	CRR073302	Leaf 3	3.308
	CRR073303	Juvenile bud 1	1.820
	CRR073304	Juvenile bud 2	3.557
	CRR073305	Juvenile bud 3	2.126
	CRR073306	Third green 1	1.690
	CRR073307	Third green 2	1.261
	CRR073308	Third green 3	2.403
	CRR073309	Second white 1	5.392
	CRR073310	Second white 2	2.440
	CRR073311	Second white 3	3.372
	CRR073312	Silver flowering 1	3.823
	CRR073313	Silver flowering 2	4.124
	CRR073314	Silver flowering 3	4.178
	CRR073315	Gold flowering 1	0.388
	CRR073316	Gold flowering 2	0.443
	CRR073317	Gold flowering 3	0.303
	CRR073318	Tawny withering 1	2.118
	CRR073319	Tawny withering 2	1.720
	CRR073320	Tawny withering 3	2.512