Detail information of GWHGAAZE008706


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273629.10PREDICTED: abscisic-aldehyde oxidase-like [Vitis vinifera]
Swissprottr|Q7G191|ALDO4_ARATH0Benzaldehyde dehydrogenase (NAD(+))
trEMBLtr|F6HAB3|F6HAB3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB49192.1}
TAIR10AT1G04580.10aldehyde oxidase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene8856969688576717-
GWHAAZE00000002mRNA8856969688576717-
GWHAAZE00000002exon8856969688569932-
GWHAAZE00000002exon8857069288570748-
GWHAAZE00000002exon8857083588570901-
GWHAAZE00000002exon8857099788571255-
GWHAAZE00000002exon8857316188574780-
GWHAAZE00000002exon8857655288576717-
GWHAAZE00000002CDS8857655288576717-
GWHAAZE00000002CDS8857316188574780-
GWHAAZE00000002CDS8857099788571255-
GWHAAZE00000002CDS8857083588570901-
GWHAAZE00000002CDS8857069288570748-
GWHAAZE00000002CDS8856969688569932-
Transcript Sequence

Network for GWHGAAZE008706

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00111.28Fer219862.80E-08
PF01799.21Fer2_2971821.30E-20
PF00941.22FAD_binding_52464181.30E-32
PF03450.18CO_deh_flav_C4375405.30E-19
PF01315.23Ald_Xan_dh_C5956573.40E-14
PF02738.19Ald_Xan_dh_C27007991.10E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09842AAO3 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Carotenoid biosynthesismap00906

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity
GO:0009055molecular_functionelectron transfer activity
GO:0051536molecular_functioniron-sulfur cluster binding
GO:0071949molecular_functionFAD binding
GO:0051537molecular_function2 iron, 2 sulfur cluster binding
GO:0046872molecular_functionmetal ion binding
GO:0050660molecular_functionflavin adenine dinucleotide binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.245
SRR3591706second leaf3.276
SRR3591707mature leaf4.601
SRR3591708Shoot apex1.643
SRR3591709Stem0.047
SRR3591710White floral bud0.124
SRR3591711White flower0.031
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.082
SRP173429 SRR8316895Juvenile bud stage 0.616
SRR8316896Juvenile bud stage 0.218
SRR8316897Juvenile bud stage 0.711
SRR8316894Third green stage 0.055
SRR8316900Third green stage 0.076
SRR8316901Third green stage 0.036
SRR8316898Complete white stage 0.066
SRR8316899Complete white stage 0.088
SRR8316903Complete white stage 0.489
SRR8316902Silver flowering stage0.018
SRR8316904Silver flowering stage0.172
SRR8316905Silver flowering stage0.100
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.076
SRP132670SRR6706286Control0.168
SRR6706287Light intensity 50%0.181
SRR6706288Light intensity 20%0.014
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.030
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.087
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.026
CNS0095597Whole white alabastrum(diploid) 40.095
CNS0095598Silvery flower (diploied) 10.643
CNS0095599Silvery flower (diploied) 20.838
CNS0095600Silvery flower (diploied) 30.233
CNS0095601Golden flower (diploid) 10.324
CNS0095602Golden flower (diploid) 20.321
CNS0095603Golden flower (diploid) 30.326
CNS0095604Slightly white alabastrum(tetraploid) 10.178
CNS0095605Slightly white alabastrum(tetraploid) 20.121
CNS0095606Slightly white alabastrum(tetraploid) 30.990
CNS0095607Whole white alabastrum(tetraploid) 10.278
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.180
CNS0095610Silvery flower (tetraploid) 10.113
CNS0095611Silvery flower (tetraploid) 20.336
CNS0095612Silvery flower (tetraploid) 30.092
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.094
CNS0095615Golden flower (tetraploid) 30.069
CRA001975CRR073297Stem 10.910
CRR073298Stem 20.713
CRR073299Stem 30.087
CRR073300Leaf 10.000
CRR073301Leaf 20.027
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.048
CRR073306Third green 10.115
CRR073307Third green 20.067
CRR073308Third green 30.038
CRR073309Second white 10.014
CRR073310Second white 20.001
CRR073311Second white 30.000
CRR073312Silver flowering 10.007
CRR073313Silver flowering 20.021
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.026
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000