Detail information of GWHGAAZE008707


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273629.10PREDICTED: abscisic-aldehyde oxidase-like [Vitis vinifera]
Swissprottr|Q7G191|ALDO4_ARATH0Benzaldehyde dehydrogenase (NAD(+))
trEMBLtr|F6HAB3|F6HAB3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB49192.1}
TAIR10AT1G04580.10aldehyde oxidase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene8865668888675056-
GWHAAZE00000002mRNA8865668888675056-
GWHAAZE00000002exon8867489188675056-
GWHAAZE00000002exon8867136088671743-
GWHAAZE00000002exon8867012188671218-
GWHAAZE00000002exon8866790088668159-
GWHAAZE00000002exon8866759588667804-
GWHAAZE00000002exon8866661788666835-
GWHAAZE00000002exon8866523088666195-
GWHAAZE00000002exon8866448488664579-
GWHAAZE00000002exon8866378888663886-
GWHAAZE00000002exon8866261988662808-
GWHAAZE00000002exon8865668888656917-
GWHAAZE00000002CDS8867489188675056-
GWHAAZE00000002CDS8867136088671743-
GWHAAZE00000002CDS8867012188671218-
GWHAAZE00000002CDS8866790088668159-
GWHAAZE00000002CDS8866759588667804-
GWHAAZE00000002CDS8866661788666835-
GWHAAZE00000002CDS8866523088666195-
GWHAAZE00000002CDS8866448488664579-
GWHAAZE00000002CDS8866378888663886-
GWHAAZE00000002CDS8866261988662808-
GWHAAZE00000002CDS8865668888656917-
Transcript Sequence

Network for GWHGAAZE008707

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00111.28Fer219865.10E-08
PF01799.21Fer2_2971821.20E-20
PF00941.22FAD_binding_51953691.90E-34
PF03450.18CO_deh_flav_C3914941.50E-20
PF01315.23Ald_Xan_dh_C5496571.10E-26
PF02738.19Ald_Xan_dh_C267912084.10E-158
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K09842AAO3 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Carotenoid biosynthesismap00906

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0009055molecular_functionelectron transfer activity
GO:0051536molecular_functioniron-sulfur cluster binding
GO:0050660molecular_functionflavin adenine dinucleotide binding
GO:0071949molecular_functionFAD binding
GO:0005506molecular_functioniron ion binding
GO:0016491molecular_functionoxidoreductase activity
GO:0051537molecular_function2 iron, 2 sulfur cluster binding
GO:0046872molecular_functionmetal ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.944
SRR3591706second leaf3.045
SRR3591707mature leaf5.629
SRR3591708Shoot apex4.536
SRR3591709Stem0.361
SRR3591710White floral bud0.588
SRR3591711White flower2.261
SRR3591712Green floral bud0.344
SRR3591713Yellow flower1.745
SRP173429 SRR8316895Juvenile bud stage 0.432
SRR8316896Juvenile bud stage 0.307
SRR8316897Juvenile bud stage 0.166
SRR8316894Third green stage 0.103
SRR8316900Third green stage 0.190
SRR8316901Third green stage 0.119
SRR8316898Complete white stage 0.065
SRR8316899Complete white stage 0.418
SRR8316903Complete white stage 0.303
SRR8316902Silver flowering stage0.054
SRR8316904Silver flowering stage0.071
SRR8316905Silver flowering stage0.039
SRR8316906Gold flowering stage 0.192
SRR8316907Gold flowering stage 0.385
SRR8316908Gold flowering stage 0.244
SRP132670SRR6706286Control0.633
SRR6706287Light intensity 50%0.505
SRR6706288Light intensity 20%0.416
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.225
CNS0095593Slightly white alabastrum(diploid) 20.310
CNS0095594Slightly white alabastrum(diploid) 30.290
CNS0095595Whole white alabastrum(diploid) 20.185
CNS0095596Whole white alabastrum(diploid) 30.149
CNS0095597Whole white alabastrum(diploid) 40.285
CNS0095598Silvery flower (diploied) 11.625
CNS0095599Silvery flower (diploied) 21.879
CNS0095600Silvery flower (diploied) 30.283
CNS0095601Golden flower (diploid) 12.033
CNS0095602Golden flower (diploid) 21.049
CNS0095603Golden flower (diploid) 30.952
CNS0095604Slightly white alabastrum(tetraploid) 10.469
CNS0095605Slightly white alabastrum(tetraploid) 20.340
CNS0095606Slightly white alabastrum(tetraploid) 31.343
CNS0095607Whole white alabastrum(tetraploid) 10.499
CNS0095608Whole white alabastrum(tetraploid) 20.106
CNS0095609Whole white alabastrum(tetraploid) 30.213
CNS0095610Silvery flower (tetraploid) 10.194
CNS0095611Silvery flower (tetraploid) 20.818
CNS0095612Silvery flower (tetraploid) 30.225
CNS0095613Golden flower (tetraploid) 10.128
CNS0095614Golden flower (tetraploid) 20.490
CNS0095615Golden flower (tetraploid) 30.068
CRA001975CRR073297Stem 10.447
CRR073298Stem 20.342
CRR073299Stem 30.206
CRR073300Leaf 10.115
CRR073301Leaf 20.098
CRR073302Leaf 30.086
CRR073303Juvenile bud 10.002
CRR073304Juvenile bud 20.010
CRR073305Juvenile bud 30.065
CRR073306Third green 10.012
CRR073307Third green 20.004
CRR073308Third green 30.088
CRR073309Second white 10.000
CRR073310Second white 20.081
CRR073311Second white 30.031
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.144
CRR073315Gold flowering 11.039
CRR073316Gold flowering 21.729
CRR073317Gold flowering 31.090
CRR073318Tawny withering 13.687
CRR073319Tawny withering 23.841
CRR073320Tawny withering 30.601