Detail information of GWHGAAZE008727


Functional Annotation

DatabaseOrthologsE valueAnnotation
Nr1UUXA7.82991E-42Chain A, Structure Of A Molybdopterin-Bound Cnx1g Domain Links Molybdenum And Copper Metabolism
Swissprottr|Q39054|CNX1_ARATH6E-41Molybdopterin adenylyltransferase
trEMBLtr|Q0WR87|Q0WR87_ARATH3E-41Molybdopterin biosynthesis CNX1 protein {ECO:0000313|EMBL:BAF00362.1}
TAIR10AT5G20990.14E-35molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene8933601389337696-
GWHAAZE00000002mRNA8933601389337696-
GWHAAZE00000002exon8933601389336101-
GWHAAZE00000002exon8933689889337055-
GWHAAZE00000002exon8933768989337696-
GWHAAZE00000002CDS8933768989337696-
GWHAAZE00000002CDS8933689889337055-
GWHAAZE00000002CDS8933601389336101-
Transcript Sequence

Network for GWHGAAZE008727

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00994.25MoCF_biosynth20804.60E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15376GPHN Metabolic pathways map01100
Folate biosynthesismap00790
GABAergic synapsemap04727

Gene Ontology

GO term OntologyName
GO:0006777biological_processMo-molybdopterin cofactor biosynthetic process

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.672
SRR3591706second leaf9.558
SRR3591707mature leaf9.205
SRR3591708Shoot apex16.548
SRR3591709Stem13.072
SRR3591710White floral bud10.405
SRR3591711White flower12.156
SRR3591712Green floral bud12.879
SRR3591713Yellow flower17.729
SRP173429 SRR8316895Juvenile bud stage 10.442
SRR8316896Juvenile bud stage 12.960
SRR8316897Juvenile bud stage 4.548
SRR8316894Third green stage 3.406
SRR8316900Third green stage 18.081
SRR8316901Third green stage 17.586
SRR8316898Complete white stage 8.820
SRR8316899Complete white stage 23.834
SRR8316903Complete white stage 13.492
SRR8316902Silver flowering stage4.314
SRR8316904Silver flowering stage5.765
SRR8316905Silver flowering stage3.602
SRR8316906Gold flowering stage 12.350
SRR8316907Gold flowering stage 8.829
SRR8316908Gold flowering stage 9.535
SRP132670SRR6706286Control14.846
SRR6706287Light intensity 50%16.910
SRR6706288Light intensity 20%14.571
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.043
CNS0095593Slightly white alabastrum(diploid) 214.856
CNS0095594Slightly white alabastrum(diploid) 310.483
CNS0095595Whole white alabastrum(diploid) 212.255
CNS0095596Whole white alabastrum(diploid) 38.643
CNS0095597Whole white alabastrum(diploid) 415.155
CNS0095598Silvery flower (diploied) 123.730
CNS0095599Silvery flower (diploied) 221.163
CNS0095600Silvery flower (diploied) 315.972
CNS0095601Golden flower (diploid) 114.896
CNS0095602Golden flower (diploid) 214.794
CNS0095603Golden flower (diploid) 315.485
CNS0095604Slightly white alabastrum(tetraploid) 112.422
CNS0095605Slightly white alabastrum(tetraploid) 214.690
CNS0095606Slightly white alabastrum(tetraploid) 323.351
CNS0095607Whole white alabastrum(tetraploid) 114.325
CNS0095608Whole white alabastrum(tetraploid) 210.639
CNS0095609Whole white alabastrum(tetraploid) 321.563
CNS0095610Silvery flower (tetraploid) 121.516
CNS0095611Silvery flower (tetraploid) 214.919
CNS0095612Silvery flower (tetraploid) 315.774
CNS0095613Golden flower (tetraploid) 112.602
CNS0095614Golden flower (tetraploid) 214.453
CNS0095615Golden flower (tetraploid) 35.121
CRA001975CRR073297Stem 124.053
CRR073298Stem 224.561
CRR073299Stem 330.796
CRR073300Leaf 128.816
CRR073301Leaf 231.538
CRR073302Leaf 322.502
CRR073303Juvenile bud 129.732
CRR073304Juvenile bud 224.079
CRR073305Juvenile bud 333.445
CRR073306Third green 17.797
CRR073307Third green 28.176
CRR073308Third green 37.750
CRR073309Second white 110.495
CRR073310Second white 26.533
CRR073311Second white 311.685
CRR073312Silver flowering 18.307
CRR073313Silver flowering 210.971
CRR073314Silver flowering 36.629
CRR073315Gold flowering 121.165
CRR073316Gold flowering 228.746
CRR073317Gold flowering 324.333
CRR073318Tawny withering 117.419
CRR073319Tawny withering 213.586
CRR073320Tawny withering 316.711