Detail information of GWHGAAZE008733


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006446684.11.6357E-106hypothetical protein CICLE_v10014503mg [Citrus clementina]
Swissprottr|Q39054|CNX1_ARATH2E-100Molybdopterin adenylyltransferase
trEMBLtr|V4W1Y8|V4W1Y8_9ROSI6E-107Uncharacterized protein {ECO:0000313|EMBL:ESR59924.1}
TAIR10AT5G20990.12E-84molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene8949578989501133-
GWHAAZE00000002mRNA8949578989501133-
GWHAAZE00000002exon8949578989496007-
GWHAAZE00000002exon8949762089497682-
GWHAAZE00000002exon8949838889498444-
GWHAAZE00000002exon8949943289499538-
GWHAAZE00000002exon8950033689500493-
GWHAAZE00000002exon8950112689501133-
GWHAAZE00000002CDS8950112689501133-
GWHAAZE00000002CDS8950033689500493-
GWHAAZE00000002CDS8949943289499538-
GWHAAZE00000002CDS8949838889498444-
GWHAAZE00000002CDS8949762089497682-
GWHAAZE00000002CDS8949578989496007-
Transcript Sequence

Network for GWHGAAZE008733

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00994.25MoCF_biosynth201551.40E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15376GPHN Metabolic pathways map01100
Folate biosynthesismap00790
GABAergic synapsemap04727

Gene Ontology

GO term OntologyName
GO:0006777biological_processMo-molybdopterin cofactor biosynthetic process

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.578
SRR3591706second leaf10.615
SRR3591707mature leaf13.843
SRR3591708Shoot apex23.147
SRR3591709Stem30.929
SRR3591710White floral bud18.431
SRR3591711White flower22.662
SRR3591712Green floral bud20.950
SRR3591713Yellow flower24.764
SRP173429 SRR8316895Juvenile bud stage 17.040
SRR8316896Juvenile bud stage 29.220
SRR8316897Juvenile bud stage 8.569
SRR8316894Third green stage 8.830
SRR8316900Third green stage 38.301
SRR8316901Third green stage 40.726
SRR8316898Complete white stage 18.518
SRR8316899Complete white stage 55.306
SRR8316903Complete white stage 27.922
SRR8316902Silver flowering stage12.143
SRR8316904Silver flowering stage9.783
SRR8316905Silver flowering stage6.705
SRR8316906Gold flowering stage 17.119
SRR8316907Gold flowering stage 28.538
SRR8316908Gold flowering stage 16.258
SRP132670SRR6706286Control29.378
SRR6706287Light intensity 50%29.951
SRR6706288Light intensity 20%33.859
CNP0000432CNS0095592Slightly white alabastrum(diploid) 132.477
CNS0095593Slightly white alabastrum(diploid) 233.081
CNS0095594Slightly white alabastrum(diploid) 334.697
CNS0095595Whole white alabastrum(diploid) 226.448
CNS0095596Whole white alabastrum(diploid) 332.366
CNS0095597Whole white alabastrum(diploid) 426.959
CNS0095598Silvery flower (diploied) 141.010
CNS0095599Silvery flower (diploied) 236.946
CNS0095600Silvery flower (diploied) 335.963
CNS0095601Golden flower (diploid) 142.359
CNS0095602Golden flower (diploid) 232.563
CNS0095603Golden flower (diploid) 329.986
CNS0095604Slightly white alabastrum(tetraploid) 131.113
CNS0095605Slightly white alabastrum(tetraploid) 226.015
CNS0095606Slightly white alabastrum(tetraploid) 337.420
CNS0095607Whole white alabastrum(tetraploid) 124.064
CNS0095608Whole white alabastrum(tetraploid) 220.533
CNS0095609Whole white alabastrum(tetraploid) 326.351
CNS0095610Silvery flower (tetraploid) 135.603
CNS0095611Silvery flower (tetraploid) 232.018
CNS0095612Silvery flower (tetraploid) 336.334
CNS0095613Golden flower (tetraploid) 117.869
CNS0095614Golden flower (tetraploid) 224.029
CNS0095615Golden flower (tetraploid) 315.057
CRA001975CRR073297Stem 140.870
CRR073298Stem 238.718
CRR073299Stem 334.355
CRR073300Leaf 151.720
CRR073301Leaf 248.738
CRR073302Leaf 335.064
CRR073303Juvenile bud 150.185
CRR073304Juvenile bud 225.380
CRR073305Juvenile bud 355.131
CRR073306Third green 19.374
CRR073307Third green 27.864
CRR073308Third green 39.661
CRR073309Second white 114.557
CRR073310Second white 212.436
CRR073311Second white 39.618
CRR073312Silver flowering 111.306
CRR073313Silver flowering 215.330
CRR073314Silver flowering 312.067
CRR073315Gold flowering 142.484
CRR073316Gold flowering 245.692
CRR073317Gold flowering 328.525
CRR073318Tawny withering 137.265
CRR073319Tawny withering 235.656
CRR073320Tawny withering 329.695