Gene detail

Detail information of GWHGAAZE008734

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011043840.1	0	PREDICTED: molybdopterin biosynthesis protein CNX1 isoform X2 [Populus euphratica]
Swissprot	tr\|Q39054\|CNX1_ARATH	2E-174	Molybdopterin adenylyltransferase
trEMBL	tr\|U5G103\|U5G103_POPTR	0	Uncharacterized protein {ECO:0000313\|EMBL:ERP57148.1}
TAIR10	AT5G20990.1	2E-143	molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1)

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	89508665	89519919	-
GWHAAZE00000002	mRNA	89508665	89519919	-
GWHAAZE00000002	exon	89519767	89519919	-
GWHAAZE00000002	exon	89518151	89518264	-
GWHAAZE00000002	exon	89516367	89516468	-
GWHAAZE00000002	exon	89516168	89516251	-
GWHAAZE00000002	exon	89511196	89511423	-
GWHAAZE00000002	exon	89510633	89510740	-
GWHAAZE00000002	exon	89510305	89510408	-
GWHAAZE00000002	exon	89508665	89508872	-
GWHAAZE00000002	CDS	89519767	89519919	-
GWHAAZE00000002	CDS	89518151	89518264	-
GWHAAZE00000002	CDS	89516367	89516468	-
GWHAAZE00000002	CDS	89516168	89516251	-
GWHAAZE00000002	CDS	89511196	89511423	-
GWHAAZE00000002	CDS	89510633	89510740	-
GWHAAZE00000002	CDS	89510305	89510408	-
GWHAAZE00000002	CDS	89508665	89508872	-

Transcript Sequence
>GWHTAAZE008744 ATGATATCAGCCGACGAAGCTCTGCAAATAGTTCTGAATGTAGCTAACCGATTGCAGCCTGTAACAGTGCCCCTTCAGGATGCTATTGGGAAAGTCTTGGCCGAGGAGATTCGAGCTCCTGACCCTCTTCCTCCTTACCCTGCCTCCATCAAGGATGGTTATGCAGTAATTGCCTCGGATGGGCCTGGTGAATACCCTATAATTACTGAATCAAGAGCAGGAAATGATGGAGTTGGTTTGACCGTGACTCCTGGAACTGTCGCATACGGATGTGACATTAAGAAAGATGCTGTAGTACTAGAATCTGGAGAAAGATTAGGTGCTGCGGAAATTGGCTTACTTGCAACTGTGGGTGTCATGATGGTGAAGGTGTATCCTACTCCAATAATTGGTGTGCTTTCTACAGGAGATGAACTTGTAGAGCCAACAACTGGGTGTTTAAATCGTGGCCAGATTAGGGACTCCAACCGCTCCATGATCCTTGCTGCTGCTACACAGCAGCAGTGCAAAGTTCTTGACCTTGGCATAGCTCGTGATGATGAAGAAGAGCTTAAGAGGGTTTTGGATAGTGCTGTCTCTGCTGGGATTCACATTCTTCTAACTTCTGGAGGTGTTTCCATGGGTGACAGGGATTTTGTCAAGCCGTTGCTTGAAAAGAGAGGGAAAGTATACTTTGATAAGGTTCTTATGAAACCAGGAAAGCCTCTTACATTTGCCGAGATCATTACGGAATCGTCAAACAAAACGACAGCCAATAAGATCCTTGCATTTGGATTACCTGGAAATCCAAGTGCATGCTCGCTTACGCAACCGTTAAAGACAGATCCACGGCGTCCAGAATTTCATCGTGCCGTCATTACTTGGGAGATGAATGACGGATCAGGCTTTCCAGGATTTGTTGCTGAGAGTACTGGTAATCAGGCTAGTAGTCGACTTTTAAGTATGAAGTCAGCAAATGCTTTTCTTGAACTGCCAGCATCAGGCACCATATTATCTGCTGGAACCTGTATTACAGCGGTTGTAATTTCTGATCTAAGCGGTTTTGCTATGAGCAAGAGTTTATTACAACCAGATTCGGGTTGTGCTGCCGAAGAAGCATGA

Network for GWHGAAZE008734

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0047

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03453.18	MoeA_N	2	67	1.80E-14
PF00994.25	MoCF_biosynth	131	267	1.90E-22
PF03454.16	MoeA_C	268	340	8.70E-17

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15376	GPHN	Metabolic pathways	map01100
		Folate biosynthesis	map00790
		GABAergic synapse	map04727

Gene Ontology

GO term	Ontology	Name
GO:0032324	biological_process	molybdopterin cofactor biosynthetic process
GO:0006777	biological_process	Mo-molybdopterin cofactor biosynthetic process

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	9.943
	SRR3591706	second leaf	6.099
	SRR3591707	mature leaf	4.188
	SRR3591708	Shoot apex	5.692
	SRR3591709	Stem	9.783
	SRR3591710	White floral bud	6.778
	SRR3591711	White flower	9.489
	SRR3591712	Green floral bud	7.071
	SRR3591713	Yellow flower	8.142
SRP173429	SRR8316895	Juvenile bud stage	5.914
	SRR8316896	Juvenile bud stage	7.591
	SRR8316897	Juvenile bud stage	2.681
	SRR8316894	Third green stage	3.720
	SRR8316900	Third green stage	13.750
	SRR8316901	Third green stage	10.723
	SRR8316898	Complete white stage	5.283
	SRR8316899	Complete white stage	16.616
	SRR8316903	Complete white stage	8.468
	SRR8316902	Silver flowering stage	3.645
	SRR8316904	Silver flowering stage	3.057
	SRR8316905	Silver flowering stage	1.502
	SRR8316906	Gold flowering stage	7.131
	SRR8316907	Gold flowering stage	8.885
	SRR8316908	Gold flowering stage	4.642
SRP132670	SRR6706286	Control	14.118
	SRR6706287	Light intensity 50%	11.068
	SRR6706288	Light intensity 20%	11.104
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	3.202
	CNS0095593	Slightly white alabastrum(diploid) 2	5.507
	CNS0095594	Slightly white alabastrum(diploid) 3	1.943
	CNS0095595	Whole white alabastrum(diploid) 2	3.305
	CNS0095596	Whole white alabastrum(diploid) 3	2.220
	CNS0095597	Whole white alabastrum(diploid) 4	4.216
	CNS0095598	Silvery flower (diploied) 1	7.057
	CNS0095599	Silvery flower (diploied) 2	5.769
	CNS0095600	Silvery flower (diploied) 3	10.339
	CNS0095601	Golden flower (diploid) 1	5.599
	CNS0095602	Golden flower (diploid) 2	11.513
	CNS0095603	Golden flower (diploid) 3	9.117
	CNS0095604	Slightly white alabastrum(tetraploid) 1	6.310
	CNS0095605	Slightly white alabastrum(tetraploid) 2	4.057
	CNS0095606	Slightly white alabastrum(tetraploid) 3	13.161
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.936
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.912
	CNS0095609	Whole white alabastrum(tetraploid) 3	9.397
	CNS0095610	Silvery flower (tetraploid) 1	10.015
	CNS0095611	Silvery flower (tetraploid) 2	13.205
	CNS0095612	Silvery flower (tetraploid) 3	9.381
	CNS0095613	Golden flower (tetraploid) 1	3.458
	CNS0095614	Golden flower (tetraploid) 2	6.564
	CNS0095615	Golden flower (tetraploid) 3	5.362
CRA001975	CRR073297	Stem 1	12.594
	CRR073298	Stem 2	12.472
	CRR073299	Stem 3	13.867
	CRR073300	Leaf 1	6.902
	CRR073301	Leaf 2	13.131
	CRR073302	Leaf 3	10.838
	CRR073303	Juvenile bud 1	15.655
	CRR073304	Juvenile bud 2	10.193
	CRR073305	Juvenile bud 3	15.006
	CRR073306	Third green 1	4.294
	CRR073307	Third green 2	2.396
	CRR073308	Third green 3	3.700
	CRR073309	Second white 1	5.286
	CRR073310	Second white 2	6.322
	CRR073311	Second white 3	5.557
	CRR073312	Silver flowering 1	2.792
	CRR073313	Silver flowering 2	4.919
	CRR073314	Silver flowering 3	4.810
	CRR073315	Gold flowering 1	7.963
	CRR073316	Gold flowering 2	16.940
	CRR073317	Gold flowering 3	12.314
	CRR073318	Tawny withering 1	8.449
	CRR073319	Tawny withering 2	4.027
	CRR073320	Tawny withering 3	4.014