Detail information of GWHGAAZE008810


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP42899.16.7796E-108hypothetical protein JCGZ_23841 [Jatropha curcas]
Swissprottr|Q9SJ52|YLS9_ARATH6E-21Protein YLS9
trEMBLtr|A0A067LFL5|A0A067LFL5_JATCU3E-108Uncharacterized protein {ECO:0000313|EMBL:KDP42899.1}
TAIR10AT2G27080.23E-60Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene9307710693077864-
GWHAAZE00000002mRNA9307710693077864-
GWHAAZE00000002exon9307710693077864-
GWHAAZE00000002CDS9307710693077864-
Transcript Sequence

Network for GWHGAAZE008810

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03168.14LEA_21242271.10E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf67.763
SRR3591706second leaf1.830
SRR3591707mature leaf1.211
SRR3591708Shoot apex6.910
SRR3591709Stem64.910
SRR3591710White floral bud17.223
SRR3591711White flower78.812
SRR3591712Green floral bud12.609
SRR3591713Yellow flower83.227
SRP173429 SRR8316895Juvenile bud stage 22.919
SRR8316896Juvenile bud stage 23.850
SRR8316897Juvenile bud stage 19.854
SRR8316894Third green stage 8.216
SRR8316900Third green stage 26.573
SRR8316901Third green stage 45.808
SRR8316898Complete white stage 5.076
SRR8316899Complete white stage 137.294
SRR8316903Complete white stage 3.885
SRR8316902Silver flowering stage12.752
SRR8316904Silver flowering stage3.166
SRR8316905Silver flowering stage4.053
SRR8316906Gold flowering stage 19.544
SRR8316907Gold flowering stage 25.916
SRR8316908Gold flowering stage 26.827
SRP132670SRR6706286Control6.793
SRR6706287Light intensity 50%8.638
SRR6706288Light intensity 20%5.256
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.133
CNS0095593Slightly white alabastrum(diploid) 278.459
CNS0095594Slightly white alabastrum(diploid) 340.366
CNS0095595Whole white alabastrum(diploid) 241.278
CNS0095596Whole white alabastrum(diploid) 34.330
CNS0095597Whole white alabastrum(diploid) 433.632
CNS0095598Silvery flower (diploied) 1126.856
CNS0095599Silvery flower (diploied) 2121.281
CNS0095600Silvery flower (diploied) 372.632
CNS0095601Golden flower (diploid) 1100.090
CNS0095602Golden flower (diploid) 2109.263
CNS0095603Golden flower (diploid) 3101.305
CNS0095604Slightly white alabastrum(tetraploid) 10.599
CNS0095605Slightly white alabastrum(tetraploid) 21.596
CNS0095606Slightly white alabastrum(tetraploid) 31.188
CNS0095607Whole white alabastrum(tetraploid) 10.345
CNS0095608Whole white alabastrum(tetraploid) 20.926
CNS0095609Whole white alabastrum(tetraploid) 31.367
CNS0095610Silvery flower (tetraploid) 113.875
CNS0095611Silvery flower (tetraploid) 24.916
CNS0095612Silvery flower (tetraploid) 326.491
CNS0095613Golden flower (tetraploid) 110.133
CNS0095614Golden flower (tetraploid) 225.905
CNS0095615Golden flower (tetraploid) 315.236
CRA001975CRR073297Stem 124.196
CRR073298Stem 232.039
CRR073299Stem 325.346
CRR073300Leaf 194.392
CRR073301Leaf 2142.715
CRR073302Leaf 399.453
CRR073303Juvenile bud 1114.327
CRR073304Juvenile bud 2118.878
CRR073305Juvenile bud 3253.050
CRR073306Third green 129.118
CRR073307Third green 2101.164
CRR073308Third green 336.124
CRR073309Second white 133.955
CRR073310Second white 221.000
CRR073311Second white 321.572
CRR073312Silver flowering 191.904
CRR073313Silver flowering 2133.732
CRR073314Silver flowering 389.084
CRR073315Gold flowering 1175.110
CRR073316Gold flowering 2255.958
CRR073317Gold flowering 3236.659
CRR073318Tawny withering 1190.091
CRR073319Tawny withering 2408.071
CRR073320Tawny withering 3262.706