Gene detail

Detail information of GWHGAAZE008820

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AGD98701.1	6.17217E-65	bZIP transcription factor family protein 3 [Camellia sinensis]
Swissprot	tr\|Q9C5Q2\|AI5L3_ARATH	7E-29	ABSCISIC ACID-INSENSITIVE 5-like protein 3
trEMBL	tr\|L7YCF9\|L7YCF9_CAMSI	2E-65	BZIP transcription factor family protein 3 {ECO:0000313\|EMBL:AGD98701.1}
TAIR10	AT2G41070.3	9E-25	Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	93524978	93525618	-
GWHAAZE00000002	mRNA	93524978	93525618	-
GWHAAZE00000002	exon	93524978	93525147	-
GWHAAZE00000002	exon	93525267	93525618	-
GWHAAZE00000002	CDS	93525267	93525618	-
GWHAAZE00000002	CDS	93524978	93525147	-

Transcript Sequence
>GWHTAAZE008830 ATGGGGATTCAGACAATGGGATTTCATGGGAGCGATCAACAGTCTCATGTGCTGCCCTTATCAAGACAAAACTCATGGTACAGCCTCAAGCTCAACGAAGTCAAGAAGCATTTGGGAGAATTGGGTAAACCACTAGGCAGCATGAACCTTGACGAGCTGCTTAAAAATATTTGGACTGCTGAATCAAATCTATCCAACAGGGAAATGGACATTGATAATGTTTCTCTTCGGCATGAAGCCATCTTAATTCGGGCTTTTGGTGGGAAGACAGTTGATGAGGTGTGGAGAGAGATAAAAAAAGGTGATAGAAGCTTTGAAGAGGTGAAAATTGAGGAAGGAGAGTCAACTCTTGGCTTGTCGCCCTCTACTTCAATTGACACATTATCCGATACACCAAAGCCGAGCCGGAAGAGGGGTGCTGTTGATGCAATTGAGAAGACCCTTGAGAGGAGGCTAAGGAGAAAGATAAAAAACAGGGAGTCTGCTGCACGTTCGAGAGCCAGAAAACAGGCAGGCTATTGA

Network for GWHGAAZE008820

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14432	ABF	Plant hormone signal transduction	map04075

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003700	molecular_function	DNA-binding transcription factor activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	19.369
	SRR3591706	second leaf	10.764
	SRR3591707	mature leaf	11.791
	SRR3591708	Shoot apex	15.061
	SRR3591709	Stem	20.829
	SRR3591710	White floral bud	33.890
	SRR3591711	White flower	30.907
	SRR3591712	Green floral bud	22.959
	SRR3591713	Yellow flower	35.179
SRP173429	SRR8316895	Juvenile bud stage	21.725
	SRR8316896	Juvenile bud stage	36.012
	SRR8316897	Juvenile bud stage	15.497
	SRR8316894	Third green stage	13.274
	SRR8316900	Third green stage	32.197
	SRR8316901	Third green stage	32.689
	SRR8316898	Complete white stage	16.447
	SRR8316899	Complete white stage	25.811
	SRR8316903	Complete white stage	28.108
	SRR8316902	Silver flowering stage	20.802
	SRR8316904	Silver flowering stage	22.963
	SRR8316905	Silver flowering stage	12.536
	SRR8316906	Gold flowering stage	49.211
	SRR8316907	Gold flowering stage	47.956
	SRR8316908	Gold flowering stage	45.922
SRP132670	SRR6706286	Control	35.239
	SRR6706287	Light intensity 50%	34.448
	SRR6706288	Light intensity 20%	34.255
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	27.281
	CNS0095593	Slightly white alabastrum(diploid) 2	22.025
	CNS0095594	Slightly white alabastrum(diploid) 3	27.378
	CNS0095595	Whole white alabastrum(diploid) 2	21.446
	CNS0095596	Whole white alabastrum(diploid) 3	21.908
	CNS0095597	Whole white alabastrum(diploid) 4	21.963
	CNS0095598	Silvery flower (diploied) 1	32.342
	CNS0095599	Silvery flower (diploied) 2	24.346
	CNS0095600	Silvery flower (diploied) 3	34.676
	CNS0095601	Golden flower (diploid) 1	36.883
	CNS0095602	Golden flower (diploid) 2	34.323
	CNS0095603	Golden flower (diploid) 3	31.732
	CNS0095604	Slightly white alabastrum(tetraploid) 1	28.767
	CNS0095605	Slightly white alabastrum(tetraploid) 2	26.788
	CNS0095606	Slightly white alabastrum(tetraploid) 3	31.055
	CNS0095607	Whole white alabastrum(tetraploid) 1	27.209
	CNS0095608	Whole white alabastrum(tetraploid) 2	17.622
	CNS0095609	Whole white alabastrum(tetraploid) 3	31.782
	CNS0095610	Silvery flower (tetraploid) 1	50.421
	CNS0095611	Silvery flower (tetraploid) 2	48.653
	CNS0095612	Silvery flower (tetraploid) 3	68.079
	CNS0095613	Golden flower (tetraploid) 1	45.027
	CNS0095614	Golden flower (tetraploid) 2	52.803
	CNS0095615	Golden flower (tetraploid) 3	54.351
CRA001975	CRR073297	Stem 1	46.123
	CRR073298	Stem 2	39.518
	CRR073299	Stem 3	29.190
	CRR073300	Leaf 1	47.189
	CRR073301	Leaf 2	45.324
	CRR073302	Leaf 3	23.866
	CRR073303	Juvenile bud 1	23.944
	CRR073304	Juvenile bud 2	24.007
	CRR073305	Juvenile bud 3	24.783
	CRR073306	Third green 1	33.049
	CRR073307	Third green 2	20.739
	CRR073308	Third green 3	23.777
	CRR073309	Second white 1	28.800
	CRR073310	Second white 2	37.782
	CRR073311	Second white 3	30.276
	CRR073312	Silver flowering 1	37.428
	CRR073313	Silver flowering 2	37.404
	CRR073314	Silver flowering 3	27.906
	CRR073315	Gold flowering 1	16.939
	CRR073316	Gold flowering 2	15.036
	CRR073317	Gold flowering 3	12.272
	CRR073318	Tawny withering 1	30.140
	CRR073319	Tawny withering 2	25.981
	CRR073320	Tawny withering 3	27.759