Detail information of GWHGAAZE008828


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011008374.10PREDICTED: COP9 signalosome complex subunit 2 isoform X1 [Populus euphratica]
Swissprottr|Q8W207|CSN2_ARATH0COP9 signalosome complex subunit 2
trEMBLtr|A9P7W9|A9P7W9_POPTR0Uncharacterized protein {ECO:0000313|EMBL:EEE88195.1}
TAIR10AT2G26990.10proteasome family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene9386493393874510-
GWHAAZE00000002mRNA9386493393874510-
GWHAAZE00000002exon9386493393864977-
GWHAAZE00000002exon9386513593865216-
GWHAAZE00000002exon9386532793865439-
GWHAAZE00000002exon9386610493866238-
GWHAAZE00000002exon9386634493866434-
GWHAAZE00000002exon9386652893866596-
GWHAAZE00000002exon9386857093868757-
GWHAAZE00000002exon9386922093869354-
GWHAAZE00000002exon9386943993869513-
GWHAAZE00000002exon9386959293869832-
GWHAAZE00000002exon9387176893871846-
GWHAAZE00000002exon9387298993873081-
GWHAAZE00000002exon9387447193874510-
GWHAAZE00000002five_prime_UTR9387448193874510-
GWHAAZE00000002CDS9387447193874480-
GWHAAZE00000002CDS9387298993873081-
GWHAAZE00000002CDS9387176893871846-
GWHAAZE00000002CDS9386959293869832-
GWHAAZE00000002CDS9386943993869513-
GWHAAZE00000002CDS9386922093869354-
GWHAAZE00000002CDS9386857093868757-
GWHAAZE00000002CDS9386652893866596-
GWHAAZE00000002CDS9386634493866434-
GWHAAZE00000002CDS9386610493866238-
GWHAAZE00000002CDS9386532793865439-
GWHAAZE00000002CDS9386513593865216-
GWHAAZE00000002CDS9386493393864977-
Transcript Sequence

Network for GWHGAAZE008828

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0010


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01399.28PCI3064065.60E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf52.677
SRR3591706second leaf23.585
SRR3591707mature leaf18.804
SRR3591708Shoot apex39.340
SRR3591709Stem47.080
SRR3591710White floral bud55.894
SRR3591711White flower68.326
SRR3591712Green floral bud51.534
SRR3591713Yellow flower82.903
SRP173429 SRR8316895Juvenile bud stage 45.844
SRR8316896Juvenile bud stage 67.340
SRR8316897Juvenile bud stage 36.047
SRR8316894Third green stage 24.704
SRR8316900Third green stage 71.031
SRR8316901Third green stage 68.699
SRR8316898Complete white stage 32.618
SRR8316899Complete white stage 72.985
SRR8316903Complete white stage 52.990
SRR8316902Silver flowering stage41.098
SRR8316904Silver flowering stage58.274
SRR8316905Silver flowering stage27.009
SRR8316906Gold flowering stage 97.975
SRR8316907Gold flowering stage 99.913
SRR8316908Gold flowering stage 101.538
SRP132670SRR6706286Control69.743
SRR6706287Light intensity 50%63.885
SRR6706288Light intensity 20%63.700
CNP0000432CNS0095592Slightly white alabastrum(diploid) 161.513
CNS0095593Slightly white alabastrum(diploid) 253.008
CNS0095594Slightly white alabastrum(diploid) 357.976
CNS0095595Whole white alabastrum(diploid) 249.572
CNS0095596Whole white alabastrum(diploid) 353.392
CNS0095597Whole white alabastrum(diploid) 442.403
CNS0095598Silvery flower (diploied) 140.480
CNS0095599Silvery flower (diploied) 245.085
CNS0095600Silvery flower (diploied) 355.194
CNS0095601Golden flower (diploid) 140.071
CNS0095602Golden flower (diploid) 253.001
CNS0095603Golden flower (diploid) 350.331
CNS0095604Slightly white alabastrum(tetraploid) 157.059
CNS0095605Slightly white alabastrum(tetraploid) 252.855
CNS0095606Slightly white alabastrum(tetraploid) 359.356
CNS0095607Whole white alabastrum(tetraploid) 150.766
CNS0095608Whole white alabastrum(tetraploid) 243.055
CNS0095609Whole white alabastrum(tetraploid) 365.794
CNS0095610Silvery flower (tetraploid) 186.514
CNS0095611Silvery flower (tetraploid) 263.446
CNS0095612Silvery flower (tetraploid) 367.587
CNS0095613Golden flower (tetraploid) 179.005
CNS0095614Golden flower (tetraploid) 283.519
CNS0095615Golden flower (tetraploid) 350.752
CRA001975CRR073297Stem 150.838
CRR073298Stem 247.678
CRR073299Stem 340.819
CRR073300Leaf 150.437
CRR073301Leaf 241.737
CRR073302Leaf 337.453
CRR073303Juvenile bud 141.372
CRR073304Juvenile bud 230.736
CRR073305Juvenile bud 327.390
CRR073306Third green 123.195
CRR073307Third green 222.814
CRR073308Third green 323.429
CRR073309Second white 115.687
CRR073310Second white 237.010
CRR073311Second white 324.766
CRR073312Silver flowering 120.452
CRR073313Silver flowering 220.699
CRR073314Silver flowering 327.811
CRR073315Gold flowering 110.288
CRR073316Gold flowering 221.873
CRR073317Gold flowering 35.695
CRR073318Tawny withering 131.833
CRR073319Tawny withering 234.037
CRR073320Tawny withering 330.633