Detail information of GWHGAAZE008833


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP42900.10hypothetical protein JCGZ_23842 [Jatropha curcas]
trEMBLtr|A0A067LEG1|A0A067LEG1_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP42900.1}
TAIR10AT2G27090.16E-148Protein of unknown function (DUF630 and DUF632)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene9405792594064855-
GWHAAZE00000002mRNA9405792594064855-
GWHAAZE00000002exon9405792594058294-
GWHAAZE00000002exon9405927094059493-
GWHAAZE00000002exon9406105894061272-
GWHAAZE00000002exon9406300494063075-
GWHAAZE00000002exon9406368994063856-
GWHAAZE00000002exon9406397694064855-
GWHAAZE00000002CDS9406397694064855-
GWHAAZE00000002CDS9406368994063856-
GWHAAZE00000002CDS9406300494063075-
GWHAAZE00000002CDS9406105894061272-
GWHAAZE00000002CDS9405927094059493-
GWHAAZE00000002CDS9405792594058294-
Transcript Sequence

Network for GWHGAAZE008833

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0048


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04783.13DUF6301595.00E-23
PF04782.13DUF6323096383.10E-96
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf24.264
SRR3591706second leaf7.372
SRR3591707mature leaf9.423
SRR3591708Shoot apex4.078
SRR3591709Stem21.717
SRR3591710White floral bud20.024
SRR3591711White flower24.927
SRR3591712Green floral bud14.282
SRR3591713Yellow flower20.402
SRP173429 SRR8316895Juvenile bud stage 5.261
SRR8316896Juvenile bud stage 7.797
SRR8316897Juvenile bud stage 4.859
SRR8316894Third green stage 4.442
SRR8316900Third green stage 11.627
SRR8316901Third green stage 8.537
SRR8316898Complete white stage 4.311
SRR8316899Complete white stage 11.984
SRR8316903Complete white stage 10.057
SRR8316902Silver flowering stage4.852
SRR8316904Silver flowering stage9.577
SRR8316905Silver flowering stage3.368
SRR8316906Gold flowering stage 18.734
SRR8316907Gold flowering stage 12.718
SRR8316908Gold flowering stage 16.838
SRP132670SRR6706286Control10.018
SRR6706287Light intensity 50%10.660
SRR6706288Light intensity 20%9.989
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.534
CNS0095593Slightly white alabastrum(diploid) 23.459
CNS0095594Slightly white alabastrum(diploid) 34.091
CNS0095595Whole white alabastrum(diploid) 23.473
CNS0095596Whole white alabastrum(diploid) 32.445
CNS0095597Whole white alabastrum(diploid) 44.187
CNS0095598Silvery flower (diploied) 17.392
CNS0095599Silvery flower (diploied) 24.971
CNS0095600Silvery flower (diploied) 315.513
CNS0095601Golden flower (diploid) 14.874
CNS0095602Golden flower (diploid) 218.391
CNS0095603Golden flower (diploid) 316.873
CNS0095604Slightly white alabastrum(tetraploid) 14.280
CNS0095605Slightly white alabastrum(tetraploid) 23.762
CNS0095606Slightly white alabastrum(tetraploid) 310.680
CNS0095607Whole white alabastrum(tetraploid) 13.509
CNS0095608Whole white alabastrum(tetraploid) 23.307
CNS0095609Whole white alabastrum(tetraploid) 38.708
CNS0095610Silvery flower (tetraploid) 113.818
CNS0095611Silvery flower (tetraploid) 213.476
CNS0095612Silvery flower (tetraploid) 315.984
CNS0095613Golden flower (tetraploid) 15.939
CNS0095614Golden flower (tetraploid) 213.613
CNS0095615Golden flower (tetraploid) 317.885
CRA001975CRR073297Stem 115.031
CRR073298Stem 215.090
CRR073299Stem 314.294
CRR073300Leaf 120.834
CRR073301Leaf 218.116
CRR073302Leaf 319.279
CRR073303Juvenile bud 120.401
CRR073304Juvenile bud 218.749
CRR073305Juvenile bud 333.347
CRR073306Third green 111.855
CRR073307Third green 28.276
CRR073308Third green 312.358
CRR073309Second white 123.710
CRR073310Second white 225.000
CRR073311Second white 329.349
CRR073312Silver flowering 127.289
CRR073313Silver flowering 227.740
CRR073314Silver flowering 320.967
CRR073315Gold flowering 16.426
CRR073316Gold flowering 212.750
CRR073317Gold flowering 39.151
CRR073318Tawny withering 111.780
CRR073319Tawny withering 210.303
CRR073320Tawny withering 313.958