Detail information of GWHGAAZE008905


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrABK21974.16.7667E-06unknown [Picea sitchensis]
Swissprottr|Q3HVN1|AGUB_SOLTU0.0000004N-carbamoylputrescine amidase
trEMBLtr|A9NMW3|A9NMW3_PICSI0.000003Putative uncharacterized protein {ECO:0000313|EMBL:ABK21974.1}
TAIR10AT2G27450.20.0003nitrilase-like protein 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene9658166996581950-
GWHAAZE00000002mRNA9658166996581950-
GWHAAZE00000002exon9658185296581950-
GWHAAZE00000002exon9658166996581708-
GWHAAZE00000002five_prime_UTR9658193596581950-
GWHAAZE00000002CDS9658185296581934-
GWHAAZE00000002CDS9658166996581708-
Transcript Sequence

Network for GWHGAAZE008905

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12251aguB Metabolic pathways map01100
Arginine and proline metabolismmap00330

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf21.480
SRR3591706second leaf11.606
SRR3591707mature leaf10.626
SRR3591708Shoot apex14.814
SRR3591709Stem12.948
SRR3591710White floral bud30.305
SRR3591711White flower30.623
SRR3591712Green floral bud23.005
SRR3591713Yellow flower27.572
SRP173429 SRR8316895Juvenile bud stage 12.569
SRR8316896Juvenile bud stage 13.713
SRR8316897Juvenile bud stage 9.200
SRR8316894Third green stage 7.184
SRR8316900Third green stage 17.980
SRR8316901Third green stage 20.286
SRR8316898Complete white stage 11.882
SRR8316899Complete white stage 19.455
SRR8316903Complete white stage 16.095
SRR8316902Silver flowering stage10.656
SRR8316904Silver flowering stage15.936
SRR8316905Silver flowering stage8.863
SRR8316906Gold flowering stage 21.118
SRR8316907Gold flowering stage 28.354
SRR8316908Gold flowering stage 22.683
SRP132670SRR6706286Control54.876
SRR6706287Light intensity 50%56.074
SRR6706288Light intensity 20%66.034
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.911
CNS0095593Slightly white alabastrum(diploid) 215.681
CNS0095594Slightly white alabastrum(diploid) 311.635
CNS0095595Whole white alabastrum(diploid) 212.936
CNS0095596Whole white alabastrum(diploid) 312.516
CNS0095597Whole white alabastrum(diploid) 49.205
CNS0095598Silvery flower (diploied) 118.197
CNS0095599Silvery flower (diploied) 214.761
CNS0095600Silvery flower (diploied) 329.211
CNS0095601Golden flower (diploid) 121.869
CNS0095602Golden flower (diploid) 224.360
CNS0095603Golden flower (diploid) 329.274
CNS0095604Slightly white alabastrum(tetraploid) 115.417
CNS0095605Slightly white alabastrum(tetraploid) 211.362
CNS0095606Slightly white alabastrum(tetraploid) 336.733
CNS0095607Whole white alabastrum(tetraploid) 18.038
CNS0095608Whole white alabastrum(tetraploid) 25.414
CNS0095609Whole white alabastrum(tetraploid) 328.304
CNS0095610Silvery flower (tetraploid) 151.058
CNS0095611Silvery flower (tetraploid) 233.110
CNS0095612Silvery flower (tetraploid) 324.046
CNS0095613Golden flower (tetraploid) 127.106
CNS0095614Golden flower (tetraploid) 245.700
CNS0095615Golden flower (tetraploid) 330.812
CRA001975CRR073297Stem 121.457
CRR073298Stem 218.075
CRR073299Stem 318.789
CRR073300Leaf 125.523
CRR073301Leaf 220.297
CRR073302Leaf 327.896
CRR073303Juvenile bud 118.515
CRR073304Juvenile bud 225.469
CRR073305Juvenile bud 313.462
CRR073306Third green 110.624
CRR073307Third green 27.089
CRR073308Third green 39.164
CRR073309Second white 14.316
CRR073310Second white 26.624
CRR073311Second white 36.089
CRR073312Silver flowering 10.912
CRR073313Silver flowering 25.969
CRR073314Silver flowering 32.986
CRR073315Gold flowering 112.575
CRR073316Gold flowering 214.203
CRR073317Gold flowering 37.594
CRR073318Tawny withering 113.315
CRR073319Tawny withering 210.762
CRR073320Tawny withering 39.379