Detail information of GWHGAAZE008936


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002523851.11.02036E-87conserved hypothetical protein [Ricinus communis]
Swissprottr|Q9XIN8|FB119_ARATH1E-65F-box protein At2g27310
trEMBLtr|B9SCY2|B9SCY2_RICCO4E-88Putative uncharacterized protein {ECO:0000313|EMBL:EEF38577.1}
TAIR10AT2G27310.11E-52F-box family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene9713361397134681-
GWHAAZE00000002mRNA9713361397134681-
GWHAAZE00000002exon9713361397133618-
GWHAAZE00000002exon9713382197134681-
GWHAAZE00000002CDS9713382197134681-
GWHAAZE00000002CDS9713361397133618-
Transcript Sequence

Network for GWHGAAZE008936

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf53.816
SRR3591706second leaf12.219
SRR3591707mature leaf4.022
SRR3591708Shoot apex10.901
SRR3591709Stem37.854
SRR3591710White floral bud40.829
SRR3591711White flower25.156
SRR3591712Green floral bud6.858
SRR3591713Yellow flower10.715
SRP173429 SRR8316895Juvenile bud stage 74.827
SRR8316896Juvenile bud stage 13.520
SRR8316897Juvenile bud stage 34.560
SRR8316894Third green stage 4.430
SRR8316900Third green stage 5.267
SRR8316901Third green stage 9.171
SRR8316898Complete white stage 2.832
SRR8316899Complete white stage 57.584
SRR8316903Complete white stage 4.291
SRR8316902Silver flowering stage4.291
SRR8316904Silver flowering stage4.235
SRR8316905Silver flowering stage4.679
SRR8316906Gold flowering stage 22.142
SRR8316907Gold flowering stage 17.837
SRR8316908Gold flowering stage 20.005
SRP132670SRR6706286Control5.141
SRR6706287Light intensity 50%8.798
SRR6706288Light intensity 20%5.535
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.436
CNS0095593Slightly white alabastrum(diploid) 229.085
CNS0095594Slightly white alabastrum(diploid) 324.640
CNS0095595Whole white alabastrum(diploid) 219.288
CNS0095596Whole white alabastrum(diploid) 33.227
CNS0095597Whole white alabastrum(diploid) 418.018
CNS0095598Silvery flower (diploied) 198.694
CNS0095599Silvery flower (diploied) 2152.961
CNS0095600Silvery flower (diploied) 351.885
CNS0095601Golden flower (diploid) 1165.241
CNS0095602Golden flower (diploid) 275.014
CNS0095603Golden flower (diploid) 377.146
CNS0095604Slightly white alabastrum(tetraploid) 10.343
CNS0095605Slightly white alabastrum(tetraploid) 20.809
CNS0095606Slightly white alabastrum(tetraploid) 31.359
CNS0095607Whole white alabastrum(tetraploid) 12.391
CNS0095608Whole white alabastrum(tetraploid) 21.966
CNS0095609Whole white alabastrum(tetraploid) 30.963
CNS0095610Silvery flower (tetraploid) 15.734
CNS0095611Silvery flower (tetraploid) 23.925
CNS0095612Silvery flower (tetraploid) 36.889
CNS0095613Golden flower (tetraploid) 16.617
CNS0095614Golden flower (tetraploid) 23.869
CNS0095615Golden flower (tetraploid) 33.731
CRA001975CRR073297Stem 111.008
CRR073298Stem 28.566
CRR073299Stem 311.885
CRR073300Leaf 18.467
CRR073301Leaf 211.219
CRR073302Leaf 310.892
CRR073303Juvenile bud 19.371
CRR073304Juvenile bud 218.072
CRR073305Juvenile bud 310.480
CRR073306Third green 15.047
CRR073307Third green 26.695
CRR073308Third green 36.158
CRR073309Second white 13.142
CRR073310Second white 24.068
CRR073311Second white 33.594
CRR073312Silver flowering 113.700
CRR073313Silver flowering 210.781
CRR073314Silver flowering 35.543
CRR073315Gold flowering 15.448
CRR073316Gold flowering 220.084
CRR073317Gold flowering 341.396
CRR073318Tawny withering 123.936
CRR073319Tawny withering 281.138
CRR073320Tawny withering 344.373