Detail information of GWHGAAZE008958


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002313674.23.3359E-134hypothetical protein POPTR_0009s14590g [Populus trichocarpa]
Swissprottr|Q9SGD1|ZWIP3_ARATH2E-111Zinc finger protein WIP3
trEMBLtr|B9HQX3|B9HQX3_POPTR1E-134Uncharacterized protein {ECO:0000313|EMBL:EEE87629.2}
TAIR10AT1G08290.13E-87WIP domain protein 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene9793095797934322+
GWHAAZE00000002mRNA9793095797934322+
GWHAAZE00000002exon9793095797931295+
GWHAAZE00000002exon9793387997934322+
GWHAAZE00000002CDS9793095797931295+
GWHAAZE00000002CDS9793387997934322+
Transcript Sequence

Network for GWHGAAZE008958

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00096.27zf-C2H2971160.0017
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.375
SRR3591706second leaf1.059
SRR3591707mature leaf3.103
SRR3591708Shoot apex1.870
SRR3591709Stem30.134
SRR3591710White floral bud0.563
SRR3591711White flower0.603
SRR3591712Green floral bud0.476
SRR3591713Yellow flower0.204
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.069
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.000
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.047
SRR8316904Silver flowering stage0.020
SRR8316905Silver flowering stage0.042
SRR8316906Gold flowering stage 0.135
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.603
SRP132670SRR6706286Control0.163
SRR6706287Light intensity 50%0.055
SRR6706288Light intensity 20%0.030
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.185
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.330
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.138
CNS0095604Slightly white alabastrum(tetraploid) 10.154
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.120
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.238
CNS0095611Silvery flower (tetraploid) 20.057
CNS0095612Silvery flower (tetraploid) 30.087
CNS0095613Golden flower (tetraploid) 10.101
CNS0095614Golden flower (tetraploid) 20.196
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.000
CRR073299Stem 30.000
CRR073300Leaf 10.000
CRR073301Leaf 20.153
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.047
CRR073313Silver flowering 20.396
CRR073314Silver flowering 30.003
CRR073315Gold flowering 10.104
CRR073316Gold flowering 20.133
CRR073317Gold flowering 30.845
CRR073318Tawny withering 124.725
CRR073319Tawny withering 29.785
CRR073320Tawny withering 326.313