Detail information of GWHGAAZE008966


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO58052.11.4588E-171hypothetical protein CISIN_1g036101mg [Citrus sinensis]
Swissprottr|Q9LXN4|HIRA_ARATH4E-149Protein HIRA
trEMBLtr|A0A067F3I8|A0A067F3I8_CITSI5E-172Uncharacterized protein {ECO:0000313|EMBL:KDO58052.1}
TAIR10AT3G44530.22E-123homolog of histone chaperone HIRA

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene9814705598150464+
GWHAAZE00000002mRNA9814705598150464+
GWHAAZE00000002exon9814705598147238+
GWHAAZE00000002exon9814760898147845+
GWHAAZE00000002exon9814863898148760+
GWHAAZE00000002exon9814961398149730+
GWHAAZE00000002exon9815003998150464+
GWHAAZE00000002CDS9814705598147238+
GWHAAZE00000002CDS9814760898147845+
GWHAAZE00000002CDS9814863898148760+
GWHAAZE00000002CDS9814961398149730+
GWHAAZE00000002CDS9815003998150464+
Transcript Sequence

Network for GWHGAAZE008966

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0025


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07569.12Hira11951.50E-49
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf17.223
SRR3591706second leaf11.787
SRR3591707mature leaf17.717
SRR3591708Shoot apex25.409
SRR3591709Stem26.027
SRR3591710White floral bud17.591
SRR3591711White flower20.899
SRR3591712Green floral bud20.921
SRR3591713Yellow flower13.066
SRP173429 SRR8316895Juvenile bud stage 11.502
SRR8316896Juvenile bud stage 16.023
SRR8316897Juvenile bud stage 9.235
SRR8316894Third green stage 5.828
SRR8316900Third green stage 20.247
SRR8316901Third green stage 16.356
SRR8316898Complete white stage 3.825
SRR8316899Complete white stage 24.905
SRR8316903Complete white stage 9.608
SRR8316902Silver flowering stage5.559
SRR8316904Silver flowering stage6.692
SRR8316905Silver flowering stage3.860
SRR8316906Gold flowering stage 9.839
SRR8316907Gold flowering stage 10.216
SRR8316908Gold flowering stage 11.149
SRP132670SRR6706286Control18.624
SRR6706287Light intensity 50%17.662
SRR6706288Light intensity 20%17.932
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.149
CNS0095593Slightly white alabastrum(diploid) 214.077
CNS0095594Slightly white alabastrum(diploid) 310.540
CNS0095595Whole white alabastrum(diploid) 212.871
CNS0095596Whole white alabastrum(diploid) 39.570
CNS0095597Whole white alabastrum(diploid) 49.323
CNS0095598Silvery flower (diploied) 114.677
CNS0095599Silvery flower (diploied) 212.422
CNS0095600Silvery flower (diploied) 314.840
CNS0095601Golden flower (diploid) 115.145
CNS0095602Golden flower (diploid) 217.283
CNS0095603Golden flower (diploid) 316.915
CNS0095604Slightly white alabastrum(tetraploid) 114.012
CNS0095605Slightly white alabastrum(tetraploid) 210.525
CNS0095606Slightly white alabastrum(tetraploid) 317.263
CNS0095607Whole white alabastrum(tetraploid) 19.370
CNS0095608Whole white alabastrum(tetraploid) 27.947
CNS0095609Whole white alabastrum(tetraploid) 312.753
CNS0095610Silvery flower (tetraploid) 115.816
CNS0095611Silvery flower (tetraploid) 214.870
CNS0095612Silvery flower (tetraploid) 313.014
CNS0095613Golden flower (tetraploid) 18.215
CNS0095614Golden flower (tetraploid) 212.835
CNS0095615Golden flower (tetraploid) 312.694
CRA001975CRR073297Stem 128.932
CRR073298Stem 229.692
CRR073299Stem 325.511
CRR073300Leaf 129.065
CRR073301Leaf 232.009
CRR073302Leaf 323.996
CRR073303Juvenile bud 129.165
CRR073304Juvenile bud 218.186
CRR073305Juvenile bud 336.990
CRR073306Third green 18.951
CRR073307Third green 28.809
CRR073308Third green 311.117
CRR073309Second white 17.532
CRR073310Second white 28.644
CRR073311Second white 38.506
CRR073312Silver flowering 18.762
CRR073313Silver flowering 28.797
CRR073314Silver flowering 310.046
CRR073315Gold flowering 118.809
CRR073316Gold flowering 225.341
CRR073317Gold flowering 317.776
CRR073318Tawny withering 133.667
CRR073319Tawny withering 235.054
CRR073320Tawny withering 334.300