Detail information of GWHGAAZE008981


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007015886.10Peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform 1 [Theobroma cacao]
Swissprottr|Q8W4D0|CPY71_ARATH0Peptidyl-prolyl cis-trans isomerase CYP71
trEMBLtr|A0A061GUH4|A0A061GUH4_THECC0Peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform 1 {ECO:0000313|EMBL:EOY33505.1}
TAIR10AT3G44600.10cyclophilin71

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene9889475298912260-
GWHAAZE00000002mRNA9889475298912260-
GWHAAZE00000002exon9889475298894842-
GWHAAZE00000002exon9889785798898010-
GWHAAZE00000002exon9889936998899592-
GWHAAZE00000002exon9890040998900541-
GWHAAZE00000002exon9890441898904479-
GWHAAZE00000002exon9890495198905127-
GWHAAZE00000002exon9890525198905322-
GWHAAZE00000002exon9890562598905700-
GWHAAZE00000002exon9890744098907564-
GWHAAZE00000002exon9890818998908436-
GWHAAZE00000002exon9890860498908649-
GWHAAZE00000002exon9890959998909687-
GWHAAZE00000002exon9891002598910110-
GWHAAZE00000002exon9891203498912260-
GWHAAZE00000002CDS9891203498912260-
GWHAAZE00000002CDS9891002598910110-
GWHAAZE00000002CDS9890959998909687-
GWHAAZE00000002CDS9890860498908649-
GWHAAZE00000002CDS9890818998908436-
GWHAAZE00000002CDS9890744098907564-
GWHAAZE00000002CDS9890562598905700-
GWHAAZE00000002CDS9890525198905322-
GWHAAZE00000002CDS9890495198905127-
GWHAAZE00000002CDS9890441898904479-
GWHAAZE00000002CDS9890040998900541-
GWHAAZE00000002CDS9889936998899592-
GWHAAZE00000002CDS9889785798898010-
GWHAAZE00000002CDS9889475998894842-
GWHAAZE00000002three_prime_UTR9889475298894758-
Transcript Sequence

Network for GWHGAAZE008981

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.33WD40871110.13
PF00160.22Pro_isomerase4475972.20E-55
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0000413biological_processprotein peptidyl-prolyl isomerization
GO:0006457biological_processprotein folding
GO:0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf19.844
SRR3591706second leaf14.886
SRR3591707mature leaf15.507
SRR3591708Shoot apex23.842
SRR3591709Stem16.332
SRR3591710White floral bud16.266
SRR3591711White flower20.047
SRR3591712Green floral bud18.026
SRR3591713Yellow flower16.037
SRP173429 SRR8316895Juvenile bud stage 11.776
SRR8316896Juvenile bud stage 16.304
SRR8316897Juvenile bud stage 7.796
SRR8316894Third green stage 7.238
SRR8316900Third green stage 17.534
SRR8316901Third green stage 15.630
SRR8316898Complete white stage 6.812
SRR8316899Complete white stage 23.715
SRR8316903Complete white stage 13.594
SRR8316902Silver flowering stage8.307
SRR8316904Silver flowering stage11.890
SRR8316905Silver flowering stage5.823
SRR8316906Gold flowering stage 19.440
SRR8316907Gold flowering stage 15.445
SRR8316908Gold flowering stage 18.047
SRP132670SRR6706286Control13.438
SRR6706287Light intensity 50%14.322
SRR6706288Light intensity 20%16.291
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.789
CNS0095593Slightly white alabastrum(diploid) 27.789
CNS0095594Slightly white alabastrum(diploid) 38.990
CNS0095595Whole white alabastrum(diploid) 28.497
CNS0095596Whole white alabastrum(diploid) 37.076
CNS0095597Whole white alabastrum(diploid) 47.860
CNS0095598Silvery flower (diploied) 111.118
CNS0095599Silvery flower (diploied) 210.580
CNS0095600Silvery flower (diploied) 315.080
CNS0095601Golden flower (diploid) 18.630
CNS0095602Golden flower (diploid) 213.307
CNS0095603Golden flower (diploid) 313.660
CNS0095604Slightly white alabastrum(tetraploid) 110.965
CNS0095605Slightly white alabastrum(tetraploid) 29.500
CNS0095606Slightly white alabastrum(tetraploid) 319.730
CNS0095607Whole white alabastrum(tetraploid) 16.443
CNS0095608Whole white alabastrum(tetraploid) 25.692
CNS0095609Whole white alabastrum(tetraploid) 314.180
CNS0095610Silvery flower (tetraploid) 119.221
CNS0095611Silvery flower (tetraploid) 218.453
CNS0095612Silvery flower (tetraploid) 317.172
CNS0095613Golden flower (tetraploid) 111.937
CNS0095614Golden flower (tetraploid) 218.614
CNS0095615Golden flower (tetraploid) 317.975
CRA001975CRR073297Stem 115.226
CRR073298Stem 212.398
CRR073299Stem 311.032
CRR073300Leaf 114.115
CRR073301Leaf 210.327
CRR073302Leaf 310.149
CRR073303Juvenile bud 19.815
CRR073304Juvenile bud 27.613
CRR073305Juvenile bud 313.154
CRR073306Third green 12.833
CRR073307Third green 24.003
CRR073308Third green 34.128
CRR073309Second white 13.620
CRR073310Second white 28.252
CRR073311Second white 37.322
CRR073312Silver flowering 15.008
CRR073313Silver flowering 26.702
CRR073314Silver flowering 35.936
CRR073315Gold flowering 15.700
CRR073316Gold flowering 216.379
CRR073317Gold flowering 37.544
CRR073318Tawny withering 19.740
CRR073319Tawny withering 28.183
CRR073320Tawny withering 39.994