Detail information of GWHGAAZE009018


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003540213.10PREDICTED: UDP-D-apiose/UDP-D-xylose synthase 2-like [Glycine max]
Swissprottr|Q9SGE0|AXS2_ARATH0UDP-D-apiose/UDP-D-xylose synthase 2
trEMBLtr|I1LTQ1|I1LTQ1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G30490.1}
TAIR10AT1G08200.10UDP-D-apiose/UDP-D-xylose synthase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene9978565899789781-
GWHAAZE00000002mRNA9978565899789781-
GWHAAZE00000002exon9978565899785770-
GWHAAZE00000002exon9978595899786093-
GWHAAZE00000002exon9978664099786732-
GWHAAZE00000002exon9978681799786918-
GWHAAZE00000002exon9978702199787154-
GWHAAZE00000002exon9978724199787355-
GWHAAZE00000002exon9978833799788444-
GWHAAZE00000002exon9978864899788740-
GWHAAZE00000002exon9978951899789781-
GWHAAZE00000002CDS9978951899789781-
GWHAAZE00000002CDS9978864899788740-
GWHAAZE00000002CDS9978833799788444-
GWHAAZE00000002CDS9978724199787355-
GWHAAZE00000002CDS9978702199787154-
GWHAAZE00000002CDS9978681799786918-
GWHAAZE00000002CDS9978664099786732-
GWHAAZE00000002CDS9978595899786093-
GWHAAZE00000002CDS9978565899785770-
Transcript Sequence

Network for GWHGAAZE009018

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01370.22Epimerase162869.30E-61
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12449AXS Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity
GO:0050662molecular_functioncoenzyme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf458.631
SRR3591706second leaf414.436
SRR3591707mature leaf284.405
SRR3591708Shoot apex289.126
SRR3591709Stem262.773
SRR3591710White floral bud222.138
SRR3591711White flower181.593
SRR3591712Green floral bud421.466
SRR3591713Yellow flower145.261
SRP173429 SRR8316895Juvenile bud stage 105.442
SRR8316896Juvenile bud stage 135.087
SRR8316897Juvenile bud stage 68.766
SRR8316894Third green stage 68.292
SRR8316900Third green stage 207.805
SRR8316901Third green stage 294.867
SRR8316898Complete white stage 229.501
SRR8316899Complete white stage 530.880
SRR8316903Complete white stage 312.978
SRR8316902Silver flowering stage71.683
SRR8316904Silver flowering stage83.128
SRR8316905Silver flowering stage40.792
SRR8316906Gold flowering stage 111.330
SRR8316907Gold flowering stage 124.695
SRR8316908Gold flowering stage 99.822
SRP132670SRR6706286Control265.574
SRR6706287Light intensity 50%318.532
SRR6706288Light intensity 20%323.328
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1150.418
CNS0095593Slightly white alabastrum(diploid) 2164.239
CNS0095594Slightly white alabastrum(diploid) 3118.991
CNS0095595Whole white alabastrum(diploid) 2117.188
CNS0095596Whole white alabastrum(diploid) 3121.365
CNS0095597Whole white alabastrum(diploid) 4131.337
CNS0095598Silvery flower (diploied) 147.979
CNS0095599Silvery flower (diploied) 248.430
CNS0095600Silvery flower (diploied) 3129.942
CNS0095601Golden flower (diploid) 132.883
CNS0095602Golden flower (diploid) 297.945
CNS0095603Golden flower (diploid) 391.984
CNS0095604Slightly white alabastrum(tetraploid) 1122.526
CNS0095605Slightly white alabastrum(tetraploid) 296.804
CNS0095606Slightly white alabastrum(tetraploid) 3239.180
CNS0095607Whole white alabastrum(tetraploid) 1112.463
CNS0095608Whole white alabastrum(tetraploid) 2116.415
CNS0095609Whole white alabastrum(tetraploid) 3147.745
CNS0095610Silvery flower (tetraploid) 180.715
CNS0095611Silvery flower (tetraploid) 246.734
CNS0095612Silvery flower (tetraploid) 319.288
CNS0095613Golden flower (tetraploid) 139.507
CNS0095614Golden flower (tetraploid) 255.840
CNS0095615Golden flower (tetraploid) 327.513
CRA001975CRR073297Stem 1134.472
CRR073298Stem 2125.033
CRR073299Stem 3124.660
CRR073300Leaf 1223.884
CRR073301Leaf 2195.044
CRR073302Leaf 3250.155
CRR073303Juvenile bud 1303.476
CRR073304Juvenile bud 2670.278
CRR073305Juvenile bud 3292.979
CRR073306Third green 1198.352
CRR073307Third green 2199.121
CRR073308Third green 3171.750
CRR073309Second white 136.066
CRR073310Second white 220.301
CRR073311Second white 314.540
CRR073312Silver flowering 118.418
CRR073313Silver flowering 222.725
CRR073314Silver flowering 316.959
CRR073315Gold flowering 1166.379
CRR073316Gold flowering 2238.786
CRR073317Gold flowering 3170.807
CRR073318Tawny withering 1302.355
CRR073319Tawny withering 2410.859
CRR073320Tawny withering 3326.532