Detail information of GWHGAAZE009108


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP07107.14.3193E-103unnamed protein product [Coffea canephora]
Swissprottr|Q9SKN3|CSPL6_ARATH2E-90CASP-like protein 5A2
trEMBLtr|A0A068UFQ8|A0A068UFQ8_COFCA2E-103CASP-like protein {ECO:0000256|RuleBase:RU361233}
TAIR10AT2G28370.19E-72Uncharacterised protein family (UPF0497)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene102675937102680093+
GWHAAZE00000002mRNA102675937102680093+
GWHAAZE00000002exon102675937102676148+
GWHAAZE00000002exon102679252102679384+
GWHAAZE00000002exon102679902102680093+
GWHAAZE00000002CDS102675937102676148+
GWHAAZE00000002CDS102679252102679384+
GWHAAZE00000002CDS102679902102680093+
Transcript Sequence

Network for GWHGAAZE009108

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0036


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04535.13DUF588351623.60E-27
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf39.751
SRR3591706second leaf20.119
SRR3591707mature leaf18.242
SRR3591708Shoot apex30.906
SRR3591709Stem63.931
SRR3591710White floral bud30.405
SRR3591711White flower35.749
SRR3591712Green floral bud36.353
SRR3591713Yellow flower40.781
SRP173429 SRR8316895Juvenile bud stage 16.704
SRR8316896Juvenile bud stage 21.422
SRR8316897Juvenile bud stage 11.817
SRR8316894Third green stage 9.693
SRR8316900Third green stage 32.133
SRR8316901Third green stage 36.598
SRR8316898Complete white stage 26.404
SRR8316899Complete white stage 68.605
SRR8316903Complete white stage 28.641
SRR8316902Silver flowering stage17.076
SRR8316904Silver flowering stage20.682
SRR8316905Silver flowering stage9.778
SRR8316906Gold flowering stage 45.075
SRR8316907Gold flowering stage 39.429
SRR8316908Gold flowering stage 46.916
SRP132670SRR6706286Control26.653
SRR6706287Light intensity 50%28.550
SRR6706288Light intensity 20%32.496
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.723
CNS0095593Slightly white alabastrum(diploid) 224.336
CNS0095594Slightly white alabastrum(diploid) 323.894
CNS0095595Whole white alabastrum(diploid) 221.617
CNS0095596Whole white alabastrum(diploid) 320.512
CNS0095597Whole white alabastrum(diploid) 422.056
CNS0095598Silvery flower (diploied) 128.607
CNS0095599Silvery flower (diploied) 221.312
CNS0095600Silvery flower (diploied) 343.899
CNS0095601Golden flower (diploid) 123.828
CNS0095602Golden flower (diploid) 243.298
CNS0095603Golden flower (diploid) 347.625
CNS0095604Slightly white alabastrum(tetraploid) 127.133
CNS0095605Slightly white alabastrum(tetraploid) 226.070
CNS0095606Slightly white alabastrum(tetraploid) 345.516
CNS0095607Whole white alabastrum(tetraploid) 123.737
CNS0095608Whole white alabastrum(tetraploid) 215.752
CNS0095609Whole white alabastrum(tetraploid) 330.318
CNS0095610Silvery flower (tetraploid) 145.165
CNS0095611Silvery flower (tetraploid) 236.380
CNS0095612Silvery flower (tetraploid) 334.284
CNS0095613Golden flower (tetraploid) 136.753
CNS0095614Golden flower (tetraploid) 243.618
CNS0095615Golden flower (tetraploid) 343.385
CRA001975CRR073297Stem 137.331
CRR073298Stem 239.664
CRR073299Stem 344.076
CRR073300Leaf 147.638
CRR073301Leaf 245.702
CRR073302Leaf 357.022
CRR073303Juvenile bud 155.582
CRR073304Juvenile bud 255.125
CRR073305Juvenile bud 360.910
CRR073306Third green 127.545
CRR073307Third green 233.097
CRR073308Third green 334.540
CRR073309Second white 129.787
CRR073310Second white 221.476
CRR073311Second white 315.439
CRR073312Silver flowering 124.429
CRR073313Silver flowering 224.378
CRR073314Silver flowering 313.418
CRR073315Gold flowering 124.155
CRR073316Gold flowering 225.472
CRR073317Gold flowering 334.448
CRR073318Tawny withering 174.059
CRR073319Tawny withering 255.394
CRR073320Tawny withering 359.722