Detail information of GWHGAAZE009118


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU38551.10hypothetical protein MIMGU_mgv1a006136mg [Erythranthe guttata]
Swissprottr|Q9FMR9|RIN1_ARATH0RuvB-like protein 1
trEMBLtr|A0A022RED0|A0A022RED0_ERYGU0Uncharacterized protein {ECO:0000313|EMBL:EYU38551.1}
TAIR10AT5G22330.10P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene102945905102950544-
GWHAAZE00000002mRNA102945905102950544-
GWHAAZE00000002exon102950314102950544-
GWHAAZE00000002exon102949663102949851-
GWHAAZE00000002exon102949012102949128-
GWHAAZE00000002exon102948716102948865-
GWHAAZE00000002exon102948466102948621-
GWHAAZE00000002exon102948123102948257-
GWHAAZE00000002exon102947677102947742-
GWHAAZE00000002exon102947482102947588-
GWHAAZE00000002exon102947138102947237-
GWHAAZE00000002exon102946937102947028-
GWHAAZE00000002exon102946293102946362-
GWHAAZE00000002exon102945905102945994-
GWHAAZE00000002five_prime_UTR102950395102950544-
GWHAAZE00000002CDS102950314102950394-
GWHAAZE00000002CDS102949663102949851-
GWHAAZE00000002CDS102949012102949128-
GWHAAZE00000002CDS102948716102948865-
GWHAAZE00000002CDS102948466102948621-
GWHAAZE00000002CDS102948123102948257-
GWHAAZE00000002CDS102947677102947742-
GWHAAZE00000002CDS102947482102947588-
GWHAAZE00000002CDS102947138102947237-
GWHAAZE00000002CDS102946937102947028-
GWHAAZE00000002CDS102946293102946362-
GWHAAZE00000002CDS102945905102945994-
Transcript Sequence

Network for GWHGAAZE009118

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06068.14TIP49143601.70E-161
PF17856.2TIP49_C3684331.70E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04499RUVBL1, RVB1, INO80H Wnt signaling pathway map04310

Gene Ontology

GO term OntologyName
GO:0003678molecular_functionDNA helicase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf30.249
SRR3591706second leaf17.576
SRR3591707mature leaf22.822
SRR3591708Shoot apex38.181
SRR3591709Stem20.204
SRR3591710White floral bud18.005
SRR3591711White flower34.524
SRR3591712Green floral bud24.666
SRR3591713Yellow flower26.496
SRP173429 SRR8316895Juvenile bud stage 24.201
SRR8316896Juvenile bud stage 30.717
SRR8316897Juvenile bud stage 16.258
SRR8316894Third green stage 12.386
SRR8316900Third green stage 33.956
SRR8316901Third green stage 27.651
SRR8316898Complete white stage 4.292
SRR8316899Complete white stage 31.329
SRR8316903Complete white stage 9.505
SRR8316902Silver flowering stage8.287
SRR8316904Silver flowering stage11.235
SRR8316905Silver flowering stage5.234
SRR8316906Gold flowering stage 17.129
SRR8316907Gold flowering stage 17.970
SRR8316908Gold flowering stage 22.229
SRP132670SRR6706286Control24.815
SRR6706287Light intensity 50%20.769
SRR6706288Light intensity 20%22.688
CNP0000432CNS0095592Slightly white alabastrum(diploid) 123.243
CNS0095593Slightly white alabastrum(diploid) 224.504
CNS0095594Slightly white alabastrum(diploid) 322.792
CNS0095595Whole white alabastrum(diploid) 220.141
CNS0095596Whole white alabastrum(diploid) 321.160
CNS0095597Whole white alabastrum(diploid) 419.233
CNS0095598Silvery flower (diploied) 125.668
CNS0095599Silvery flower (diploied) 225.260
CNS0095600Silvery flower (diploied) 321.364
CNS0095601Golden flower (diploid) 120.335
CNS0095602Golden flower (diploid) 217.674
CNS0095603Golden flower (diploid) 316.153
CNS0095604Slightly white alabastrum(tetraploid) 125.223
CNS0095605Slightly white alabastrum(tetraploid) 220.979
CNS0095606Slightly white alabastrum(tetraploid) 343.418
CNS0095607Whole white alabastrum(tetraploid) 113.936
CNS0095608Whole white alabastrum(tetraploid) 211.662
CNS0095609Whole white alabastrum(tetraploid) 329.485
CNS0095610Silvery flower (tetraploid) 124.591
CNS0095611Silvery flower (tetraploid) 228.317
CNS0095612Silvery flower (tetraploid) 315.657
CNS0095613Golden flower (tetraploid) 113.193
CNS0095614Golden flower (tetraploid) 219.386
CNS0095615Golden flower (tetraploid) 311.541
CRA001975CRR073297Stem 120.571
CRR073298Stem 222.717
CRR073299Stem 322.263
CRR073300Leaf 120.824
CRR073301Leaf 219.773
CRR073302Leaf 320.417
CRR073303Juvenile bud 116.039
CRR073304Juvenile bud 212.281
CRR073305Juvenile bud 322.677
CRR073306Third green 12.193
CRR073307Third green 22.318
CRR073308Third green 33.251
CRR073309Second white 15.281
CRR073310Second white 26.377
CRR073311Second white 34.950
CRR073312Silver flowering 13.347
CRR073313Silver flowering 24.149
CRR073314Silver flowering 33.960
CRR073315Gold flowering 116.826
CRR073316Gold flowering 218.389
CRR073317Gold flowering 38.685
CRR073318Tawny withering 116.103
CRR073319Tawny withering 211.139
CRR073320Tawny withering 319.571