Detail information of GWHGAAZE009129


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU18857.11.45484E-81hypothetical protein MIMGU_mgv1a014474mg [Erythranthe guttata]
Swissprottr|Q9LJZ5|UBC19_ARATH2E-59Ubiquitin-conjugating enzyme E2 19
trEMBLtr|A0A022PRA6|A0A022PRA6_ERYGU5E-82Uncharacterized protein {ECO:0000313|EMBL:EYU18857.1}
TAIR10AT3G20060.11E-47ubiquitin-conjugating enzyme19

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene103101263103101917-
GWHAAZE00000002mRNA103101263103101917-
GWHAAZE00000002exon103101263103101321-
GWHAAZE00000002exon103101405103101468-
GWHAAZE00000002exon103101687103101917-
GWHAAZE00000002CDS103101687103101917-
GWHAAZE00000002CDS103101405103101468-
GWHAAZE00000002CDS103101263103101321-
Transcript Sequence

Network for GWHGAAZE009129

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.27UQ_con71172.50E-41
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K06688UBE2C, UBC11 Ubiquitin mediated proteolysis map04120

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf62.876
SRR3591706second leaf19.307
SRR3591707mature leaf26.507
SRR3591708Shoot apex21.635
SRR3591709Stem66.920
SRR3591710White floral bud40.308
SRR3591711White flower42.326
SRR3591712Green floral bud55.254
SRR3591713Yellow flower50.276
SRP173429 SRR8316895Juvenile bud stage 17.038
SRR8316896Juvenile bud stage 30.988
SRR8316897Juvenile bud stage 17.076
SRR8316894Third green stage 14.091
SRR8316900Third green stage 43.112
SRR8316901Third green stage 47.594
SRR8316898Complete white stage 27.599
SRR8316899Complete white stage 63.593
SRR8316903Complete white stage 35.505
SRR8316902Silver flowering stage18.728
SRR8316904Silver flowering stage26.628
SRR8316905Silver flowering stage11.081
SRR8316906Gold flowering stage 32.358
SRR8316907Gold flowering stage 28.349
SRR8316908Gold flowering stage 32.330
SRP132670SRR6706286Control10.853
SRR6706287Light intensity 50%12.948
SRR6706288Light intensity 20%15.067
CNP0000432CNS0095592Slightly white alabastrum(diploid) 129.498
CNS0095593Slightly white alabastrum(diploid) 228.466
CNS0095594Slightly white alabastrum(diploid) 327.215
CNS0095595Whole white alabastrum(diploid) 229.988
CNS0095596Whole white alabastrum(diploid) 335.860
CNS0095597Whole white alabastrum(diploid) 434.730
CNS0095598Silvery flower (diploied) 124.528
CNS0095599Silvery flower (diploied) 218.816
CNS0095600Silvery flower (diploied) 336.998
CNS0095601Golden flower (diploid) 117.571
CNS0095602Golden flower (diploid) 225.980
CNS0095603Golden flower (diploid) 328.536
CNS0095604Slightly white alabastrum(tetraploid) 131.289
CNS0095605Slightly white alabastrum(tetraploid) 227.253
CNS0095606Slightly white alabastrum(tetraploid) 317.838
CNS0095607Whole white alabastrum(tetraploid) 133.299
CNS0095608Whole white alabastrum(tetraploid) 233.435
CNS0095609Whole white alabastrum(tetraploid) 320.277
CNS0095610Silvery flower (tetraploid) 126.428
CNS0095611Silvery flower (tetraploid) 232.697
CNS0095612Silvery flower (tetraploid) 323.560
CNS0095613Golden flower (tetraploid) 121.957
CNS0095614Golden flower (tetraploid) 221.634
CNS0095615Golden flower (tetraploid) 329.784
CRA001975CRR073297Stem 120.988
CRR073298Stem 225.619
CRR073299Stem 322.722
CRR073300Leaf 132.355
CRR073301Leaf 231.317
CRR073302Leaf 332.328
CRR073303Juvenile bud 138.079
CRR073304Juvenile bud 233.919
CRR073305Juvenile bud 325.212
CRR073306Third green 115.474
CRR073307Third green 222.697
CRR073308Third green 317.832
CRR073309Second white 122.211
CRR073310Second white 217.116
CRR073311Second white 312.231
CRR073312Silver flowering 19.753
CRR073313Silver flowering 213.316
CRR073314Silver flowering 310.469
CRR073315Gold flowering 148.221
CRR073316Gold flowering 238.452
CRR073317Gold flowering 329.400
CRR073318Tawny withering 153.879
CRR073319Tawny withering 250.205
CRR073320Tawny withering 350.879