Gene detail

Detail information of GWHGAAZE009196

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CAN66786.1	0	hypothetical protein VITISV_037767 [Vitis vinifera]
Swissprot	tr\|Q9LZD3\|E70A1_ARATH	1E-94	Exocyst complex component EXO70A1
trEMBL	tr\|A5AIG4\|A5AIG4_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN66786.1}
TAIR10	AT2G39380.1	1E-158	exocyst subunit exo70 family protein H2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	104981963	104983843	-
GWHAAZE00000002	mRNA	104981963	104983843	-
GWHAAZE00000002	exon	104981963	104983843	-
GWHAAZE00000002	CDS	104981963	104983843	-

Transcript Sequence
>GWHTAAZE009206 ATGAGGAACATTTTCTTTAATTCGACAGCTCCTTCATCGCCATCAACCTCATACAATTCTTCCCCAATGCGAACCCCACCACGCCACATGATCTCCGCTTCCATGATGGAGGAAAACATCGACCACGCCGAATCAATCATCACCAAATGGGACGCCAATTCCTCCACCTACTCCAAAGTAGACCAACTCTTTCGCAACGATAACCGCAGTGCAAGCAATGATTTCATCAACTCTGTGAAAAACTTACAATCCGCTATGCACTTTTTTATAACTGAAAGTTCCGGTTCCCACAAACTCACTCGCGCTCAAAAGTTAATGCAAATTGCCATGAAGAGGCTCGAGGTTGAATTTTACCGGATTTTATCTTCGAATCGGAGCTCTCTCGATGCGGAGTCCGTCTCCAGCCAAACTTCCCGTGCTTCGACGCGATCGAGCCTTTCTGATACTGAAGATGACAATTCAGAGGAAGAGCCGAATTCGGGGGCCAAATCCGATAGAGTTTCGGAGATTGTTATGAGGGATTTAAAGGCTATTGCAGATTGTATGATCTCGACAGGCTATGGAAAGGAGTGTCTTAAGATCTACAAACTGATTCGTAAATCGATTATCGACGAGAGTTTGTATCATCTCGGTGTTGACAGATCGACTTCTTCGCAGATAAATAAGATGGAGTGGGATGTTATCGATTACAAGATTAAGAACTGGTTACACGCAGTGAAATTTGCAGTGAAGACTCTCTTCTATGGGGAGAGAATCCTCTGCGATTACGTTTTCTCCGCCTCTGATAAAATCCGAGAATCGTGCTTCGCGGACATCTCGAGAGACGGAGCCCTTTCCCTGTTTGCCTTCGCTGAAAATGTTGCCAAAGGAAAGAAATCTCCCGAGAAAATGTTCCGTATACTCGATCTCTACGATACTATTTCAGAATTATGGCCCGAAATGGAGTTTATATTCTCGTTTGAATCAACCTCAACGGTTCGGGCACAGGCGGTAGCGGCTTTAGTAAAACTCGGCGAGGCCGTCAGATTAATGCTCACGGATTTTGAGGCCGCCATTCAGAAGGATTCCTCTAAATCCATAGTCCCCGCAGGTGGAGTACATCCTTTAGCCCGATACGTCATGAACTACATCATTTTTCTAAGCGATTACAGCGGTATATTATCCGACATAGTCGCCGATTGGCCACTGACAGTACAATCTCCGTTACCGGAATCGTACATATCTAGTCCATTTGCCGGTGACATCGAGCCATCTGCGATATCCGAACGACTGGCTTGGATTATGCTTGTTCTTCTCTGCAAACTTGACGGGAAAGCAAAGTTATATAAAGACGTATCGCAGTCGTATCTTTTCTTAGCTAACAACTTAAACTACGTCGTTTCAAAGGTTAAAACCTCGAATTTAAAACTGTTATTAGGTGATGATTGGCTGGCAAATCATGAAATGAAAGTGAGACAGTATGTAGCAAATTACGAGAGAATGAGCTGGAACAAAGTGTTCTCTTCTATGCCGGATAATCCCGCCGGAATATTGCCGGAGAAGGCAATAGACTGTTTCCGGAGGTTCAATGCTGCGTTTGAAGAGGCGTACCAGAAACAGATGACGTGGGTCGTCTCTGATTCGAAGCTCCGGGACGAAATTAAAGTATCAGTGGCGAAGAAGATTGTTCCGGTATACCGGAATTTCTACGAGAGGTTTAGGGGGACTTTCCGGTCGGAGATCGGAGTCGATTCGGTGGTGAGATATGCGCCTGAGGATTTAGCGAATTATTTGTCGGATTTGTTTTATGGGAGCGGAGTTTCGGGGAGTAATAATACGGTGTCGTATTCGTATGCATCTTCGGCTCCGTCTTCTTCGCCATCGCCATCACGTGAGCGATGA

Network for GWHGAAZE009196

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	233	593	2.00E-113

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.758
	SRR3591706	second leaf	0.559
	SRR3591707	mature leaf	0.445
	SRR3591708	Shoot apex	0.483
	SRR3591709	Stem	4.247
	SRR3591710	White floral bud	14.010
	SRR3591711	White flower	49.276
	SRR3591712	Green floral bud	1.408
	SRR3591713	Yellow flower	98.417
SRP173429	SRR8316895	Juvenile bud stage	8.912
	SRR8316896	Juvenile bud stage	9.291
	SRR8316897	Juvenile bud stage	9.651
	SRR8316894	Third green stage	0.737
	SRR8316900	Third green stage	0.894
	SRR8316901	Third green stage	6.291
	SRR8316898	Complete white stage	1.449
	SRR8316899	Complete white stage	0.987
	SRR8316903	Complete white stage	1.681
	SRR8316902	Silver flowering stage	7.949
	SRR8316904	Silver flowering stage	5.320
	SRR8316905	Silver flowering stage	3.697
	SRR8316906	Gold flowering stage	56.481
	SRR8316907	Gold flowering stage	49.572
	SRR8316908	Gold flowering stage	57.428
SRP132670	SRR6706286	Control	3.314
	SRR6706287	Light intensity 50%	2.745
	SRR6706288	Light intensity 20%	1.244
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.064
	CNS0095593	Slightly white alabastrum(diploid) 2	1.345
	CNS0095594	Slightly white alabastrum(diploid) 3	3.207
	CNS0095595	Whole white alabastrum(diploid) 2	0.631
	CNS0095596	Whole white alabastrum(diploid) 3	0.421
	CNS0095597	Whole white alabastrum(diploid) 4	0.639
	CNS0095598	Silvery flower (diploied) 1	8.890
	CNS0095599	Silvery flower (diploied) 2	4.432
	CNS0095600	Silvery flower (diploied) 3	16.692
	CNS0095601	Golden flower (diploid) 1	6.969
	CNS0095602	Golden flower (diploid) 2	20.655
	CNS0095603	Golden flower (diploid) 3	18.522
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.473
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.844
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.201
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.022
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.109
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.427
	CNS0095610	Silvery flower (tetraploid) 1	2.518
	CNS0095611	Silvery flower (tetraploid) 2	0.881
	CNS0095612	Silvery flower (tetraploid) 3	9.083
	CNS0095613	Golden flower (tetraploid) 1	5.350
	CNS0095614	Golden flower (tetraploid) 2	3.813
	CNS0095615	Golden flower (tetraploid) 3	7.940
CRA001975	CRR073297	Stem 1	3.079
	CRR073298	Stem 2	3.753
	CRR073299	Stem 3	2.100
	CRR073300	Leaf 1	0.926
	CRR073301	Leaf 2	2.546
	CRR073302	Leaf 3	4.067
	CRR073303	Juvenile bud 1	0.465
	CRR073304	Juvenile bud 2	1.416
	CRR073305	Juvenile bud 3	0.869
	CRR073306	Third green 1	15.528
	CRR073307	Third green 2	12.672
	CRR073308	Third green 3	14.631
	CRR073309	Second white 1	32.648
	CRR073310	Second white 2	45.748
	CRR073311	Second white 3	69.595
	CRR073312	Silver flowering 1	307.500
	CRR073313	Silver flowering 2	251.634
	CRR073314	Silver flowering 3	244.885
	CRR073315	Gold flowering 1	0.993
	CRR073316	Gold flowering 2	6.807
	CRR073317	Gold flowering 3	5.193
	CRR073318	Tawny withering 1	2.579
	CRR073319	Tawny withering 2	9.157
	CRR073320	Tawny withering 3	3.542