Detail information of GWHGAAZE009224


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP44990.10hypothetical protein JCGZ_01490 [Jatropha curcas]
Swissprottr|Q9ZV36|UXS6_ARATH0UDP-glucuronic acid decarboxylase 6
trEMBLtr|A0A067LJY1|A0A067LJY1_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP44990.1}
TAIR10AT2G28760.37E-177UDP-XYL synthase 6

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene105765115105769458-
GWHAAZE00000002mRNA105765115105769458-
GWHAAZE00000002exon105765115105765297-
GWHAAZE00000002exon105765608105765648-
GWHAAZE00000002exon105765762105765825-
GWHAAZE00000002exon105765917105765983-
GWHAAZE00000002exon105766711105766804-
GWHAAZE00000002exon105766900105766977-
GWHAAZE00000002exon105767214105767302-
GWHAAZE00000002exon105767476105767540-
GWHAAZE00000002exon105767797105767888-
GWHAAZE00000002exon105768034105768121-
GWHAAZE00000002exon105768234105768320-
GWHAAZE00000002exon105769393105769458-
GWHAAZE00000002CDS105769393105769458-
GWHAAZE00000002CDS105768234105768320-
GWHAAZE00000002CDS105768034105768121-
GWHAAZE00000002CDS105767797105767888-
GWHAAZE00000002CDS105767476105767540-
GWHAAZE00000002CDS105767214105767302-
GWHAAZE00000002CDS105766900105766977-
GWHAAZE00000002CDS105766711105766804-
GWHAAZE00000002CDS105765917105765983-
GWHAAZE00000002CDS105765762105765825-
GWHAAZE00000002CDS105765608105765648-
GWHAAZE00000002CDS105765115105765297-
Transcript Sequence

Network for GWHGAAZE009224

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16363.6GDP_Man_Dehyd283221.60E-56
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08678UXS1, uxs Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.070
SRR3591706second leaf0.307
SRR3591707mature leaf0.063
SRR3591708Shoot apex1.381
SRR3591709Stem4.267
SRR3591710White floral bud5.181
SRR3591711White flower0.916
SRR3591712Green floral bud74.610
SRR3591713Yellow flower0.099
SRP173429 SRR8316895Juvenile bud stage 24.189
SRR8316896Juvenile bud stage 68.609
SRR8316897Juvenile bud stage 37.126
SRR8316894Third green stage 23.819
SRR8316900Third green stage 82.575
SRR8316901Third green stage 101.293
SRR8316898Complete white stage 0.203
SRR8316899Complete white stage 0.318
SRR8316903Complete white stage 0.253
SRR8316902Silver flowering stage0.036
SRR8316904Silver flowering stage0.062
SRR8316905Silver flowering stage0.121
SRR8316906Gold flowering stage 0.122
SRR8316907Gold flowering stage 0.177
SRR8316908Gold flowering stage 0.082
SRP132670SRR6706286Control33.450
SRR6706287Light intensity 50%30.528
SRR6706288Light intensity 20%25.794
CNP0000432CNS0095592Slightly white alabastrum(diploid) 180.747
CNS0095593Slightly white alabastrum(diploid) 248.310
CNS0095594Slightly white alabastrum(diploid) 399.396
CNS0095595Whole white alabastrum(diploid) 270.390
CNS0095596Whole white alabastrum(diploid) 385.340
CNS0095597Whole white alabastrum(diploid) 454.682
CNS0095598Silvery flower (diploied) 10.315
CNS0095599Silvery flower (diploied) 20.396
CNS0095600Silvery flower (diploied) 30.135
CNS0095601Golden flower (diploid) 10.501
CNS0095602Golden flower (diploid) 20.132
CNS0095603Golden flower (diploid) 30.096
CNS0095604Slightly white alabastrum(tetraploid) 1127.745
CNS0095605Slightly white alabastrum(tetraploid) 2108.992
CNS0095606Slightly white alabastrum(tetraploid) 30.205
CNS0095607Whole white alabastrum(tetraploid) 1142.503
CNS0095608Whole white alabastrum(tetraploid) 2125.369
CNS0095609Whole white alabastrum(tetraploid) 3101.335
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.089
CNS0095612Silvery flower (tetraploid) 30.384
CNS0095613Golden flower (tetraploid) 10.148
CNS0095614Golden flower (tetraploid) 20.270
CNS0095615Golden flower (tetraploid) 30.295
CRA001975CRR073297Stem 128.170
CRR073298Stem 225.765
CRR073299Stem 318.058
CRR073300Leaf 136.531
CRR073301Leaf 242.064
CRR073302Leaf 334.937
CRR073303Juvenile bud 110.633
CRR073304Juvenile bud 28.290
CRR073305Juvenile bud 30.646
CRR073306Third green 10.512
CRR073307Third green 21.103
CRR073308Third green 30.584
CRR073309Second white 10.117
CRR073310Second white 20.194
CRR073311Second white 30.158
CRR073312Silver flowering 10.386
CRR073313Silver flowering 21.206
CRR073314Silver flowering 30.536
CRR073315Gold flowering 10.730
CRR073316Gold flowering 20.362
CRR073317Gold flowering 30.517
CRR073318Tawny withering 12.896
CRR073319Tawny withering 22.418
CRR073320Tawny withering 33.114