Detail information of GWHGAAZE009289


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFK41064.12.35852E-86unknown [Medicago truncatula]
Swissprottr|P27880|HSP12_MEDSA2E-8318.2 kDa class I heat shock protein
trEMBLtr|I3SLC2|I3SLC2_MEDTR9E-87Uncharacterized protein {ECO:0000313|EMBL:AFK41064.1}
TAIR10AT2G29500.11E-56HSP20-like chaperones superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene107190500107191051-
GWHAAZE00000002mRNA107190500107191051-
GWHAAZE00000002exon107190500107191051-
GWHAAZE00000002CDS107190500107191051-
Transcript Sequence

Network for GWHGAAZE009289

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.22HSP20531567.50E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf24.138
SRR3591706second leaf9.865
SRR3591707mature leaf10.777
SRR3591708Shoot apex23.411
SRR3591709Stem23.904
SRR3591710White floral bud23.320
SRR3591711White flower22.916
SRR3591712Green floral bud28.635
SRR3591713Yellow flower10.487
SRP173429 SRR8316895Juvenile bud stage 327.433
SRR8316896Juvenile bud stage 1034.592
SRR8316897Juvenile bud stage 269.848
SRR8316894Third green stage 20.985
SRR8316900Third green stage 91.715
SRR8316901Third green stage 142.753
SRR8316898Complete white stage 23.226
SRR8316899Complete white stage 69.057
SRR8316903Complete white stage 41.628
SRR8316902Silver flowering stage46.157
SRR8316904Silver flowering stage38.107
SRR8316905Silver flowering stage35.810
SRR8316906Gold flowering stage 86.204
SRR8316907Gold flowering stage 86.977
SRR8316908Gold flowering stage 57.018
SRP132670SRR6706286Control26.609
SRR6706287Light intensity 50%27.649
SRR6706288Light intensity 20%25.046
CNP0000432CNS0095592Slightly white alabastrum(diploid) 158.363
CNS0095593Slightly white alabastrum(diploid) 252.650
CNS0095594Slightly white alabastrum(diploid) 354.609
CNS0095595Whole white alabastrum(diploid) 246.510
CNS0095596Whole white alabastrum(diploid) 349.600
CNS0095597Whole white alabastrum(diploid) 452.189
CNS0095598Silvery flower (diploied) 174.450
CNS0095599Silvery flower (diploied) 2635.561
CNS0095600Silvery flower (diploied) 3303.339
CNS0095601Golden flower (diploid) 11163.312
CNS0095602Golden flower (diploid) 2355.017
CNS0095603Golden flower (diploid) 3367.727
CNS0095604Slightly white alabastrum(tetraploid) 171.760
CNS0095605Slightly white alabastrum(tetraploid) 267.021
CNS0095606Slightly white alabastrum(tetraploid) 399.809
CNS0095607Whole white alabastrum(tetraploid) 143.930
CNS0095608Whole white alabastrum(tetraploid) 248.164
CNS0095609Whole white alabastrum(tetraploid) 390.340
CNS0095610Silvery flower (tetraploid) 161.077
CNS0095611Silvery flower (tetraploid) 295.564
CNS0095612Silvery flower (tetraploid) 3179.640
CNS0095613Golden flower (tetraploid) 146.019
CNS0095614Golden flower (tetraploid) 248.570
CNS0095615Golden flower (tetraploid) 37.018
CRA001975CRR073297Stem 122.775
CRR073298Stem 221.922
CRR073299Stem 324.719
CRR073300Leaf 125.954
CRR073301Leaf 220.238
CRR073302Leaf 332.338
CRR073303Juvenile bud 140.351
CRR073304Juvenile bud 235.596
CRR073305Juvenile bud 323.105
CRR073306Third green 129.517
CRR073307Third green 235.360
CRR073308Third green 326.474
CRR073309Second white 113.916
CRR073310Second white 213.763
CRR073311Second white 39.861
CRR073312Silver flowering 13.586
CRR073313Silver flowering 24.540
CRR073314Silver flowering 30.944
CRR073315Gold flowering 120.657
CRR073316Gold flowering 225.853
CRR073317Gold flowering 315.454
CRR073318Tawny withering 112.536
CRR073319Tawny withering 215.022
CRR073320Tawny withering 315.465