Detail information of GWHGAAZE009297


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFK41064.14.93214E-89unknown [Medicago truncatula]
Swissprottr|P05478|HSP16_SOYBN1E-8618.5 kDa class I heat shock protein
trEMBLtr|I3SLC2|I3SLC2_MEDTR2E-89Uncharacterized protein {ECO:0000313|EMBL:AFK41064.1}
TAIR10AT2G29500.12E-55HSP20-like chaperones superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene107259625107260098+
GWHAAZE00000002mRNA107259625107260098+
GWHAAZE00000002exon107259625107260098+
GWHAAZE00000002CDS107259625107260098+
Transcript Sequence

Network for GWHGAAZE009297

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.22HSP20531567.60E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf29.314
SRR3591706second leaf8.804
SRR3591707mature leaf22.152
SRR3591708Shoot apex21.189
SRR3591709Stem25.272
SRR3591710White floral bud8.175
SRR3591711White flower10.305
SRR3591712Green floral bud12.828
SRR3591713Yellow flower2.180
SRP173429 SRR8316895Juvenile bud stage 694.585
SRR8316896Juvenile bud stage 1675.498
SRR8316897Juvenile bud stage 665.267
SRR8316894Third green stage 27.133
SRR8316900Third green stage 109.633
SRR8316901Third green stage 267.328
SRR8316898Complete white stage 66.647
SRR8316899Complete white stage 64.720
SRR8316903Complete white stage 87.781
SRR8316902Silver flowering stage100.935
SRR8316904Silver flowering stage109.880
SRR8316905Silver flowering stage60.809
SRR8316906Gold flowering stage 214.760
SRR8316907Gold flowering stage 283.370
SRR8316908Gold flowering stage 145.182
SRP132670SRR6706286Control93.078
SRR6706287Light intensity 50%66.349
SRR6706288Light intensity 20%60.802
CNP0000432CNS0095592Slightly white alabastrum(diploid) 151.584
CNS0095593Slightly white alabastrum(diploid) 249.153
CNS0095594Slightly white alabastrum(diploid) 362.125
CNS0095595Whole white alabastrum(diploid) 239.782
CNS0095596Whole white alabastrum(diploid) 340.469
CNS0095597Whole white alabastrum(diploid) 445.841
CNS0095598Silvery flower (diploied) 178.036
CNS0095599Silvery flower (diploied) 21002.704
CNS0095600Silvery flower (diploied) 3555.418
CNS0095601Golden flower (diploid) 11808.268
CNS0095602Golden flower (diploid) 2669.338
CNS0095603Golden flower (diploid) 3660.320
CNS0095604Slightly white alabastrum(tetraploid) 1120.364
CNS0095605Slightly white alabastrum(tetraploid) 2118.406
CNS0095606Slightly white alabastrum(tetraploid) 3181.470
CNS0095607Whole white alabastrum(tetraploid) 177.726
CNS0095608Whole white alabastrum(tetraploid) 260.345
CNS0095609Whole white alabastrum(tetraploid) 3128.120
CNS0095610Silvery flower (tetraploid) 149.637
CNS0095611Silvery flower (tetraploid) 2104.428
CNS0095612Silvery flower (tetraploid) 3163.932
CNS0095613Golden flower (tetraploid) 154.731
CNS0095614Golden flower (tetraploid) 244.171
CNS0095615Golden flower (tetraploid) 33.658
CRA001975CRR073297Stem 120.929
CRR073298Stem 222.746
CRR073299Stem 325.523
CRR073300Leaf 117.914
CRR073301Leaf 216.983
CRR073302Leaf 324.532
CRR073303Juvenile bud 129.392
CRR073304Juvenile bud 233.944
CRR073305Juvenile bud 321.242
CRR073306Third green 1275.584
CRR073307Third green 2381.172
CRR073308Third green 3211.812
CRR073309Second white 176.690
CRR073310Second white 285.473
CRR073311Second white 354.324
CRR073312Silver flowering 124.031
CRR073313Silver flowering 213.457
CRR073314Silver flowering 316.601
CRR073315Gold flowering 116.522
CRR073316Gold flowering 220.349
CRR073317Gold flowering 38.163
CRR073318Tawny withering 125.759
CRR073319Tawny withering 228.527
CRR073320Tawny withering 328.350