Gene detail

Detail information of GWHGAAZE009308

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002281136.1	0	PREDICTED: cytosolic enolase 3 [Vitis vinifera]
Swissprot	tr\|Q9ZW34\|ENO3_ARATH	0	Cytosolic enolase 3
trEMBL	tr\|F6GUV5\|F6GUV5_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB43513.1}
TAIR10	AT2G29560.1	5E-154	cytosolic enolase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	107392736	107407093	+
GWHAAZE00000002	mRNA	107392736	107407093	+
GWHAAZE00000002	exon	107392736	107392930	+
GWHAAZE00000002	exon	107393279	107393395	+
GWHAAZE00000002	exon	107394272	107394352	+
GWHAAZE00000002	exon	107395018	107395106	+
GWHAAZE00000002	exon	107395234	107395337	+
GWHAAZE00000002	exon	107396094	107396192	+
GWHAAZE00000002	exon	107396322	107396407	+
GWHAAZE00000002	exon	107405285	107405425	+
GWHAAZE00000002	exon	107406427	107406624	+
GWHAAZE00000002	exon	107407025	107407093	+
GWHAAZE00000002	CDS	107392736	107392930	+
GWHAAZE00000002	CDS	107393279	107393395	+
GWHAAZE00000002	CDS	107394272	107394352	+
GWHAAZE00000002	CDS	107395018	107395106	+
GWHAAZE00000002	CDS	107395234	107395337	+
GWHAAZE00000002	CDS	107396094	107396192	+
GWHAAZE00000002	CDS	107396322	107396407	+
GWHAAZE00000002	CDS	107405285	107405425	+
GWHAAZE00000002	CDS	107406427	107406624	+
GWHAAZE00000002	CDS	107407025	107407093	+

Transcript Sequence
>GWHTAAZE009318 ATGGCATTATTTTACCCCAGGTATGAGGCTATTGAATTACGTGATGGAGACAAGGGAACATACCTTGGGAACAGTGTGAATAGAGCTGTTAGGAATATCAATGAGAAAATATCTGAAGCTTTAGTGGGGATGGATCCAACTCTCCAGGCCCAGATTGATCAGGCTATGATAGATTTGGACAAGACAGAGAAGAAGGTTCCACTTTACAAACACATTGCTGATCTTTCTGGAAAAACCAATCTGATTCTTCCTGTCCCTGGATTTACTCTCATAAGCGGTGGGAAGCACGCTGGGAACAGTCTGCCCCTCCGCGAAATCATGATTCTCCCAATTGGTGCAAGGAAATTTGAGGAGGCAATGCAAATAGGCTCTGAGACTTATCATCATTTAAAGCTTTGTGGTGTTCACCATTCTGCTTCTTTTGCTCATATATTGTTTCTCACCCTTGTTGAAAAGGCAGGCTGTTATTACAGAGAAATATGCTTTAAAGAAGGGCTGGATCTTGTTATGGAGGCCATTGGCAGAACAGGGTATAACGAGAAAGTAAAGATTGCTATTGATGTTGCTGCTACTGATTTTTGCATAGGTACAAAGTATGATTTAGATTTTAAGAATCCAAATAAGTCTGGACAAAATTTCAAGTCTGGAGAGGATATGATTGAGATGTACAAAGAACTCTGTGCAGACTACCCAATTGTTTCAATTGAGGATCCGTTTGACAAGGAGGACTGGGAACAAGTCAAGTATTTTTCTGGTCTTGAAATTTGCCAGAAATTTCCCGCTTTTTTGTTAAATTCTGCAAGATTAACCCTAGATTCATTCCAGGTTGTTGGAGATGAGTTGTTGGTGTCGAATCCCAAGCGTATAAAGAGGGCCATACAAGAGGTTGCTTGTAATGCTCTTGTCCTCAAGGTGAATCAGATTGGGACGGTAACAGAAGTCATTGATGTAGTTAAGATGGCAAAGGATGCTCATTGGGGAGTGCTGATATCTCAAAGAAGTGGGGAAACCGAAGATTCTTTCATAGCTGATCTATCAGTTGGCCTTGCTACTGGTCAGATTAAAGCTGGTGCACCTTGCCGTGGAGAACGGCTAGCAAAGTACAACCAGTTGATTAGAATCGAAGAAGAGCTCGGTGACCAAGCAATTTATGTTGGTGAAGACTGGAGGCAATCTTAA

Network for GWHGAAZE009308

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03952.17	Enolase_N	7	66	2.70E-17
PF00113.23	Enolase_C	81	390	5.80E-103

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01689	ENO, eno	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Biosynthesis of amino acids	map01230
		Glycolysis / Gluconeogenesis	map00010
		Methane metabolism	map00680
		RNA degradation	map03018
		HIF-1 signaling pathway	map04066

Gene Ontology

GO term	Ontology	Name
GO:0006096	biological_process	glycolytic process
GO:0000015	cellular_component	phosphopyruvate hydratase complex
GO:0000287	molecular_function	magnesium ion binding
GO:0004634	molecular_function	phosphopyruvate hydratase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	33.801
	SRR3591706	second leaf	15.350
	SRR3591707	mature leaf	7.043
	SRR3591708	Shoot apex	29.239
	SRR3591709	Stem	19.278
	SRR3591710	White floral bud	18.767
	SRR3591711	White flower	20.879
	SRR3591712	Green floral bud	28.799
	SRR3591713	Yellow flower	15.451
SRP173429	SRR8316895	Juvenile bud stage	22.281
	SRR8316896	Juvenile bud stage	34.491
	SRR8316897	Juvenile bud stage	19.381
	SRR8316894	Third green stage	13.654
	SRR8316900	Third green stage	36.364
	SRR8316901	Third green stage	36.998
	SRR8316898	Complete white stage	7.644
	SRR8316899	Complete white stage	30.236
	SRR8316903	Complete white stage	15.706
	SRR8316902	Silver flowering stage	8.706
	SRR8316904	Silver flowering stage	11.907
	SRR8316905	Silver flowering stage	4.764
	SRR8316906	Gold flowering stage	15.112
	SRR8316907	Gold flowering stage	14.719
	SRR8316908	Gold flowering stage	18.358
SRP132670	SRR6706286	Control	19.445
	SRR6706287	Light intensity 50%	20.812
	SRR6706288	Light intensity 20%	22.487
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	28.980
	CNS0095593	Slightly white alabastrum(diploid) 2	29.668
	CNS0095594	Slightly white alabastrum(diploid) 3	35.347
	CNS0095595	Whole white alabastrum(diploid) 2	27.936
	CNS0095596	Whole white alabastrum(diploid) 3	25.209
	CNS0095597	Whole white alabastrum(diploid) 4	24.006
	CNS0095598	Silvery flower (diploied) 1	19.648
	CNS0095599	Silvery flower (diploied) 2	15.717
	CNS0095600	Silvery flower (diploied) 3	15.587
	CNS0095601	Golden flower (diploid) 1	15.358
	CNS0095602	Golden flower (diploid) 2	15.376
	CNS0095603	Golden flower (diploid) 3	13.726
	CNS0095604	Slightly white alabastrum(tetraploid) 1	36.708
	CNS0095605	Slightly white alabastrum(tetraploid) 2	31.848
	CNS0095606	Slightly white alabastrum(tetraploid) 3	29.765
	CNS0095607	Whole white alabastrum(tetraploid) 1	22.789
	CNS0095608	Whole white alabastrum(tetraploid) 2	15.755
	CNS0095609	Whole white alabastrum(tetraploid) 3	25.923
	CNS0095610	Silvery flower (tetraploid) 1	17.384
	CNS0095611	Silvery flower (tetraploid) 2	16.279
	CNS0095612	Silvery flower (tetraploid) 3	14.709
	CNS0095613	Golden flower (tetraploid) 1	10.991
	CNS0095614	Golden flower (tetraploid) 2	15.078
	CNS0095615	Golden flower (tetraploid) 3	6.717
CRA001975	CRR073297	Stem 1	33.439
	CRR073298	Stem 2	30.461
	CRR073299	Stem 3	23.718
	CRR073300	Leaf 1	30.185
	CRR073301	Leaf 2	32.117
	CRR073302	Leaf 3	29.475
	CRR073303	Juvenile bud 1	27.941
	CRR073304	Juvenile bud 2	15.317
	CRR073305	Juvenile bud 3	23.146
	CRR073306	Third green 1	3.808
	CRR073307	Third green 2	3.727
	CRR073308	Third green 3	5.582
	CRR073309	Second white 1	6.151
	CRR073310	Second white 2	5.717
	CRR073311	Second white 3	5.684
	CRR073312	Silver flowering 1	3.527
	CRR073313	Silver flowering 2	4.300
	CRR073314	Silver flowering 3	3.043
	CRR073315	Gold flowering 1	12.389
	CRR073316	Gold flowering 2	14.329
	CRR073317	Gold flowering 3	5.942
	CRR073318	Tawny withering 1	25.792
	CRR073319	Tawny withering 2	20.447
	CRR073320	Tawny withering 3	29.036