Detail information of GWHGAAZE009326


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI15987.39.0212E-148unnamed protein product [Vitis vinifera]
trEMBLtr|D7SK11|D7SK11_VITVI3E-148Putative uncharacterized protein {ECO:0000313|EMBL:CBI15987.3}
TAIR10AT2G29660.12E-87zinc finger (C2H2 type) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene107914766107916546+
GWHAAZE00000002mRNA107914766107916546+
GWHAAZE00000002exon107914766107915304+
GWHAAZE00000002exon107915961107916546+
GWHAAZE00000002CDS107914766107915304+
GWHAAZE00000002CDS107915961107916450+
GWHAAZE00000002three_prime_UTR107916451107916546+
Transcript Sequence

Network for GWHGAAZE009326

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf39.411
SRR3591706second leaf21.125
SRR3591707mature leaf6.012
SRR3591708Shoot apex67.105
SRR3591709Stem29.022
SRR3591710White floral bud31.755
SRR3591711White flower17.227
SRR3591712Green floral bud62.876
SRR3591713Yellow flower3.647
SRP173429 SRR8316895Juvenile bud stage 50.558
SRR8316896Juvenile bud stage 52.659
SRR8316897Juvenile bud stage 37.577
SRR8316894Third green stage 19.719
SRR8316900Third green stage 45.412
SRR8316901Third green stage 45.786
SRR8316898Complete white stage 7.490
SRR8316899Complete white stage 49.515
SRR8316903Complete white stage 15.710
SRR8316902Silver flowering stage2.288
SRR8316904Silver flowering stage3.153
SRR8316905Silver flowering stage0.526
SRR8316906Gold flowering stage 0.300
SRR8316907Gold flowering stage 1.063
SRR8316908Gold flowering stage 3.233
SRP132670SRR6706286Control55.529
SRR6706287Light intensity 50%52.065
SRR6706288Light intensity 20%53.964
CNP0000432CNS0095592Slightly white alabastrum(diploid) 163.925
CNS0095593Slightly white alabastrum(diploid) 258.766
CNS0095594Slightly white alabastrum(diploid) 345.786
CNS0095595Whole white alabastrum(diploid) 237.368
CNS0095596Whole white alabastrum(diploid) 330.214
CNS0095597Whole white alabastrum(diploid) 430.743
CNS0095598Silvery flower (diploied) 18.954
CNS0095599Silvery flower (diploied) 25.624
CNS0095600Silvery flower (diploied) 36.520
CNS0095601Golden flower (diploid) 15.022
CNS0095602Golden flower (diploid) 24.322
CNS0095603Golden flower (diploid) 34.536
CNS0095604Slightly white alabastrum(tetraploid) 122.762
CNS0095605Slightly white alabastrum(tetraploid) 224.506
CNS0095606Slightly white alabastrum(tetraploid) 347.039
CNS0095607Whole white alabastrum(tetraploid) 113.654
CNS0095608Whole white alabastrum(tetraploid) 26.888
CNS0095609Whole white alabastrum(tetraploid) 36.102
CNS0095610Silvery flower (tetraploid) 13.959
CNS0095611Silvery flower (tetraploid) 24.297
CNS0095612Silvery flower (tetraploid) 33.188
CNS0095613Golden flower (tetraploid) 10.628
CNS0095614Golden flower (tetraploid) 26.774
CNS0095615Golden flower (tetraploid) 31.066
CRA001975CRR073297Stem 195.147
CRR073298Stem 293.255
CRR073299Stem 3114.156
CRR073300Leaf 168.684
CRR073301Leaf 279.897
CRR073302Leaf 364.517
CRR073303Juvenile bud 166.597
CRR073304Juvenile bud 241.937
CRR073305Juvenile bud 3114.005
CRR073306Third green 13.019
CRR073307Third green 26.455
CRR073308Third green 39.047
CRR073309Second white 10.154
CRR073310Second white 20.374
CRR073311Second white 30.713
CRR073312Silver flowering 11.725
CRR073313Silver flowering 23.836
CRR073314Silver flowering 30.451
CRR073315Gold flowering 14.920
CRR073316Gold flowering 24.004
CRR073317Gold flowering 37.613
CRR073318Tawny withering 154.857
CRR073319Tawny withering 242.763
CRR073320Tawny withering 365.784