Detail information of GWHGAAZE009337


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011082394.10PREDICTED: non-specific phospholipase C1 [Sesamum indicum]
Swissprottr|Q8L7Y9|NPC1_ARATH0Non-specific phospholipase C1 (Precursor)
trEMBLtr|F6GUS4|F6GUS4_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB43482.1}
TAIR10AT1G07230.10non-specific phospholipase C1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene108092424108096965+
GWHAAZE00000002mRNA108092424108096965+
GWHAAZE00000002exon108092424108092965+
GWHAAZE00000002exon108094283108094851+
GWHAAZE00000002exon108095758108095934+
GWHAAZE00000002exon108096652108096965+
GWHAAZE00000002five_prime_UTR108092424108092435+
GWHAAZE00000002CDS108092436108092965+
GWHAAZE00000002CDS108094283108094851+
GWHAAZE00000002CDS108095758108095934+
GWHAAZE00000002CDS108096652108096965+
Transcript Sequence

Network for GWHGAAZE009337

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04185.15Phosphoesterase363957.60E-105
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01114plc Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Inositol phosphate metabolismmap00562
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565
Quorum sensingmap02024
Thyroid hormone signaling pathwaymap04919

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity
GO:0016788molecular_functionhydrolase activity, acting on ester bonds

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf19.607
SRR3591706second leaf18.099
SRR3591707mature leaf40.070
SRR3591708Shoot apex16.681
SRR3591709Stem38.179
SRR3591710White floral bud35.755
SRR3591711White flower36.171
SRR3591712Green floral bud18.730
SRR3591713Yellow flower12.583
SRP173429 SRR8316895Juvenile bud stage 7.770
SRR8316896Juvenile bud stage 13.204
SRR8316897Juvenile bud stage 4.322
SRR8316894Third green stage 7.279
SRR8316900Third green stage 17.843
SRR8316901Third green stage 20.841
SRR8316898Complete white stage 21.791
SRR8316899Complete white stage 38.046
SRR8316903Complete white stage 42.549
SRR8316902Silver flowering stage25.154
SRR8316904Silver flowering stage36.465
SRR8316905Silver flowering stage17.587
SRR8316906Gold flowering stage 25.565
SRR8316907Gold flowering stage 23.671
SRR8316908Gold flowering stage 39.540
SRP132670SRR6706286Control24.126
SRR6706287Light intensity 50%21.119
SRR6706288Light intensity 20%20.836
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.738
CNS0095593Slightly white alabastrum(diploid) 212.231
CNS0095594Slightly white alabastrum(diploid) 312.556
CNS0095595Whole white alabastrum(diploid) 213.023
CNS0095596Whole white alabastrum(diploid) 311.974
CNS0095597Whole white alabastrum(diploid) 414.723
CNS0095598Silvery flower (diploied) 122.175
CNS0095599Silvery flower (diploied) 221.421
CNS0095600Silvery flower (diploied) 384.075
CNS0095601Golden flower (diploid) 118.862
CNS0095602Golden flower (diploid) 254.443
CNS0095603Golden flower (diploid) 352.932
CNS0095604Slightly white alabastrum(tetraploid) 116.605
CNS0095605Slightly white alabastrum(tetraploid) 212.469
CNS0095606Slightly white alabastrum(tetraploid) 331.684
CNS0095607Whole white alabastrum(tetraploid) 111.357
CNS0095608Whole white alabastrum(tetraploid) 211.374
CNS0095609Whole white alabastrum(tetraploid) 320.093
CNS0095610Silvery flower (tetraploid) 188.015
CNS0095611Silvery flower (tetraploid) 2102.149
CNS0095612Silvery flower (tetraploid) 348.596
CNS0095613Golden flower (tetraploid) 123.461
CNS0095614Golden flower (tetraploid) 248.896
CNS0095615Golden flower (tetraploid) 316.101
CRA001975CRR073297Stem 116.659
CRR073298Stem 212.963
CRR073299Stem 319.475
CRR073300Leaf 115.850
CRR073301Leaf 216.091
CRR073302Leaf 316.121
CRR073303Juvenile bud 116.175
CRR073304Juvenile bud 213.170
CRR073305Juvenile bud 323.660
CRR073306Third green 17.966
CRR073307Third green 26.157
CRR073308Third green 37.670
CRR073309Second white 114.791
CRR073310Second white 212.764
CRR073311Second white 39.656
CRR073312Silver flowering 17.458
CRR073313Silver flowering 211.474
CRR073314Silver flowering 312.806
CRR073315Gold flowering 133.253
CRR073316Gold flowering 236.306
CRR073317Gold flowering 339.114
CRR073318Tawny withering 133.751
CRR073319Tawny withering 225.085
CRR073320Tawny withering 325.280