Detail information of GWHGAAZE009351


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrNP_001268166.10asparagine synthetase [glutamine-hydrolyzing]-like [Vitis vinifera]
Swissprottr|P31752|ASNS_ASPOF0Asparagine synthetase [glutamine-hydrolyzing]
trEMBLtr|G3G8K0|G3G8K0_VITVI0Asparagine synthetase {ECO:0000256|PIRNR:PIRNR001589}
TAIR10AT3G47340.10glutamine-dependent asparagine synthase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene108397961108402485-
GWHAAZE00000002mRNA108397961108402485-
GWHAAZE00000002exon108402391108402485-
GWHAAZE00000002exon108401559108401697-
GWHAAZE00000002exon108401325108401420-
GWHAAZE00000002exon108400850108400991-
GWHAAZE00000002exon108400574108400764-
GWHAAZE00000002exon108400239108400400-
GWHAAZE00000002exon108400060108400140-
GWHAAZE00000002exon108399748108399969-
GWHAAZE00000002exon108399363108399497-
GWHAAZE00000002exon108399062108399142-
GWHAAZE00000002exon108398817108398903-
GWHAAZE00000002exon108398613108398720-
GWHAAZE00000002exon108397961108398271-
GWHAAZE00000002CDS108402391108402485-
GWHAAZE00000002CDS108401559108401697-
GWHAAZE00000002CDS108401325108401420-
GWHAAZE00000002CDS108400850108400991-
GWHAAZE00000002CDS108400574108400764-
GWHAAZE00000002CDS108400239108400400-
GWHAAZE00000002CDS108400060108400140-
GWHAAZE00000002CDS108399748108399969-
GWHAAZE00000002CDS108399363108399497-
GWHAAZE00000002CDS108399062108399142-
GWHAAZE00000002CDS108398817108398903-
GWHAAZE00000002CDS108398613108398720-
GWHAAZE00000002CDS108398026108398271-
GWHAAZE00000002three_prime_UTR108397961108398025-
Transcript Sequence

Network for GWHGAAZE009351

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13537.7GATase_7531704.50E-40
PF00733.22Asn_synthase2153669.10E-58
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01953asnB, ASNS Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of amino acidsmap01230
Alanine, aspartate and glutamate metabolismmap00250

Gene Ontology

GO term OntologyName
GO:0006529biological_processasparagine biosynthetic process
GO:0004066molecular_functionasparagine synthase (glutamine-hydrolyzing) activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.649
SRR3591706second leaf0.098
SRR3591707mature leaf0.000
SRR3591708Shoot apex1.839
SRR3591709Stem0.307
SRR3591710White floral bud16.139
SRR3591711White flower2.783
SRR3591712Green floral bud2.568
SRR3591713Yellow flower67.284
SRP173429 SRR8316895Juvenile bud stage 1.459
SRR8316896Juvenile bud stage 3.000
SRR8316897Juvenile bud stage 0.087
SRR8316894Third green stage 0.738
SRR8316900Third green stage 3.158
SRR8316901Third green stage 3.814
SRR8316898Complete white stage 2.279
SRR8316899Complete white stage 0.183
SRR8316903Complete white stage 3.650
SRR8316902Silver flowering stage2.494
SRR8316904Silver flowering stage2.272
SRR8316905Silver flowering stage0.879
SRR8316906Gold flowering stage 7.136
SRR8316907Gold flowering stage 6.348
SRR8316908Gold flowering stage 0.441
SRP132670SRR6706286Control6.652
SRR6706287Light intensity 50%4.942
SRR6706288Light intensity 20%3.393
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.427
CNS0095593Slightly white alabastrum(diploid) 21.853
CNS0095594Slightly white alabastrum(diploid) 35.521
CNS0095595Whole white alabastrum(diploid) 23.522
CNS0095596Whole white alabastrum(diploid) 34.740
CNS0095597Whole white alabastrum(diploid) 43.329
CNS0095598Silvery flower (diploied) 13.902
CNS0095599Silvery flower (diploied) 23.012
CNS0095600Silvery flower (diploied) 32.641
CNS0095601Golden flower (diploid) 16.576
CNS0095602Golden flower (diploid) 229.033
CNS0095603Golden flower (diploid) 327.869
CNS0095604Slightly white alabastrum(tetraploid) 13.169
CNS0095605Slightly white alabastrum(tetraploid) 22.452
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 15.421
CNS0095608Whole white alabastrum(tetraploid) 210.018
CNS0095609Whole white alabastrum(tetraploid) 35.538
CNS0095610Silvery flower (tetraploid) 10.686
CNS0095611Silvery flower (tetraploid) 20.941
CNS0095612Silvery flower (tetraploid) 32.463
CNS0095613Golden flower (tetraploid) 14.313
CNS0095614Golden flower (tetraploid) 20.552
CNS0095615Golden flower (tetraploid) 313.772
CRA001975CRR073297Stem 12.308
CRR073298Stem 22.160
CRR073299Stem 32.188
CRR073300Leaf 11.859
CRR073301Leaf 21.894
CRR073302Leaf 31.897
CRR073303Juvenile bud 13.563
CRR073304Juvenile bud 25.462
CRR073305Juvenile bud 30.728
CRR073306Third green 14.643
CRR073307Third green 26.729
CRR073308Third green 34.842
CRR073309Second white 10.544
CRR073310Second white 20.811
CRR073311Second white 31.832
CRR073312Silver flowering 114.736
CRR073313Silver flowering 222.537
CRR073314Silver flowering 318.477
CRR073315Gold flowering 13.304
CRR073316Gold flowering 20.405
CRR073317Gold flowering 30.836
CRR073318Tawny withering 13.244
CRR073319Tawny withering 23.048
CRR073320Tawny withering 33.500